Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,385 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
Pa04g2821Pa04g2821.1

…GO:0045892 | mRNA regulatory element binding translation repressor activity | DNA-binding transcription factor activity | protein binding | nucleus | response to temperature stimulus | negative regulation of flower development | sequence-specific DNA binding | negative regulation of DNA-templated tr…

Show annotation evidence
eggNOG
Preferred name: SVP | Seed ortholog: 4432.A0A1U7ZMM0 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|ZT-16, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BZM-27
GO
GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009266 response to temperature stimulus; GO:0009910 negative regulation of flower development; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa04g2854Pa04g2854.1

…of type II interferon-mediated signaling pathway | RNA polymerase II-specific DNA-binding transcription factor binding | skeletal muscle acetylcholine-gated channel clustering | cellular senescence | IkappaB kinase complex binding | DNA-binding transcription factor binding | ATP-dependent protein fo…

Show annotation evidence
eggNOG
Preferred name: ATJ1 | Seed ortholog: 337451.A0A3S3NZR8 | COG: COG0484 | eggNOG OG: DnaJ@131567|DhA-24!, DnaJ_C@131221|DlS-29, DnaJ_C@131567|eM-17, DnaJ_CXXCXGXG@131567|G-3!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000740 nuclear membrane fusion; GO:0001671 ATPase activator activity; GO:0002119 nematode larval development; GO:0005113 patched binding; GO:0005133 type II interferon receptor binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006264 mitochondrial DNA replication; GO:0006457 protein folding; GO:0006458 'de novo' protein...
KEGG
KO: K03686 | Pathway: 05203 | BRITE: 00001, 03029, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa04g2871Pa04g2871.1

…1 | 03000 | HLH_122_173 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC104608628 | Seed ortholog: 337451.A0A443PGR8 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3193|AAN-17, HLH@3398|Aqo-20, HLH@35493|gX-15
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K09092, K22495 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2881Pa04g2881.1

…73 | GO:0048768 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to water deprivation | response to blue light | response to abscisic acid | abscisic acid-activated signaling pathway | negative regulation o…

Show annotation evidence
eggNOG
Preferred name: LOC104608635 | Seed ortholog: 337451.A0A443PGU0 | COG: S | eggNOG OG: HALZ@131567|s-8, HALZ@3398|Kb-16, Homeodomain@131567|XU-17, Homeodomain@1437183|NCf-36, Homeodomain@2759|ACU-20!, Homeodomain@3193|FTx-30, Homeodomain@3398|GUG-31, Homeodomain@35493|BwQ-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009637 response to blue light; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway; GO:0009788 negative regulation of abscisic acid-activated...
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2891Pa04g2891.1

…92 | GO:2001280 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | embryo sac development | endosperm development | pollen tube guidance | vegetative to reproductive phase transition of meris…

Show annotation evidence
eggNOG
Preferred name: MYB98 | Seed ortholog: 337451.A0A443PGQ5 | eggNOG OG: Myb_DNA-binding@131567|ACl-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0009960 endosperm development; GO:0010183 pollen tube guidance; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010262 somatic embryogenesis; GO...
KEGG
KO: K09420, K09422, K09425, K21769 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2913Pa04g2913.1

…6@2759|A-1 | UNK.09J6@3193|GN-16 | S | GO:0003700 | GO:0005634 | GO:0009813 | DNA-binding transcription factor activity | nucleus | flavonoid biosynthetic process

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eggNOG
Preferred name: TT1 | Seed ortholog: 337451.A0A3S3PG69 | COG: S | eggNOG OG: UNK.09J6@2759|A-1, UNK.09J6@3193|GN-16
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009813 flavonoid biosynthetic process
eggNOGGO
eggNOG-inferred
Pa04g2915Pa04g2915.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | biological_process | suberin biosynthetic process | positive regulation of fatty acid biosynthetic process | cellular response to auxin st…

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eggNOG
Preferred name: MYB39 | Seed ortholog: 337451.A0A3S3ND86 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|Miz-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2920Pa04g2920.1

…ain development | female pregnancy | respiratory gaseous exchange by respiratory system | transcription factor binding | biological_process | glial cell migration | post-embryonic development | negative regulation of autophagy | negative regulation of gene expression | negative regulation of protein…

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eggNOG
Preferred name: LOC104606005 | Seed ortholog: 337451.A0A443PGR0 | COG: S | eggNOG OG: MAGE@2759|A-1
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000724 double-strand break repair via homologous recombination; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0001764 neuron migration; GO:0003016 respiratory system process; GO:0003674 molecular_function; GO:0003690 double-stranded DNA binding; GO:0003713 transcription coactivator activity; GO:0004705 JUN kinase activity...
KEGG
KO: K24127 | Pathway: 04722 | BRITE: 00001, 04990
eggNOGGOKEGG
eggNOG-inferred
Pa04g2940Pa04g2940.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | biological_process | suberin biosynthetic process | positive regulation of fatty acid biosynthetic process | cellular response to auxin st…

Show annotation evidence
eggNOG
Preferred name: MYB39 | Seed ortholog: 337451.A0A3S3MUB6 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|Miz-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2941Pa04g2941.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | biological_process | suberin biosynthetic process | positive regulation of fatty acid biosynthetic process | cellular response to auxin st…

Show annotation evidence
eggNOG
Preferred name: MYB39 | Seed ortholog: 337451.A0A3S3PG59 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|Miz-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2942Pa04g2942.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | biological_process | suberin biosynthetic process | positive regulation of fatty acid biosynthetic process | cellular response to auxin st…

Show annotation evidence
eggNOG
Preferred name: MYB39 | Seed ortholog: 337451.A0A3S3NZN7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|Miz-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2943Pa04g2943.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | biological_process | suberin biosynthetic process | positive regulation of fatty acid biosynthetic process | cellular response to auxin st…

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eggNOG
Preferred name: MYB39 | Seed ortholog: 337451.A0A443PGL3 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|Miz-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2958Pa04g2958.1

…GO:0042742 | GO:0043565 | GO:0050832 | GO:0070417 | GO:0106167 | GO:1900367 | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | cytoplasm | regulation of DNA-templated transcription | response to cold | leaf senescence | defense response to bacterium | sequ…

Show annotation evidence
eggNOG
Preferred name: LOC104605988 | Seed ortholog: 337451.A0A3S3ND67 | COG: S | eggNOG OG: Ank_2@131567|Mm-10, Ank_2@1437183|kAg-32, Ank_2@2759|BXW-16, Ank_2@3193|Xgc-28, CG-1@2759|A-1, CG-1@3193|Ak-9, CG-1@3398|FJ-15, CG-1@35493|P-5, CG-1@58023|Bs-11, IQ@131567|aD-16, IQ@3398|COo-26, IQ@35493|Alf-22
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0010150 leaf senescence; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding; GO:0050832 defense response to fungus; GO:0070417 cellular response...
KEGG
KO: K21596 | Pathway: 01523, 03440, 04010, 04014, 04024, 04062, 04064, 04066, 04071, 04075, 04151, 04210, 04211, 04218, 04380, 04613, 04620, 04621, 04622, 04623, 04624, 04625, 04657, 04658, 04659, 04660, 04662, 04668, 04722, 04820, 04917, 04920, 04926, 04931, 04932, 04933, 04936, 05010, 05022, 05030, 05132, 05133, 05134, 05135, 05140, 05142, 05145, 05146, 05152, 05160, 05161, 05162, 05163, 05164, 05165, 05166,...
eggNOGGOKEGG
eggNOG-inferred
Pa04g2966Pa04g2966.1

…95 | GO:0071472 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to osmotic stress | response to heat | response to cold | response to water deprivation | respons…

Show annotation evidence
eggNOG
Preferred name: RAP2-4 | Seed ortholog: 337451.A0A3S3N7S1 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|FbR-32, AP2@3193|KQ-15, AP2@33090|Hu-14, AP2@58023|lZ-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009415 response to water; GO:0009416...
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2983Pa04g2983.1

…GO:0005515 | GO:0005634 | GO:0006355 | GO:0009555 | GO:0010152 | GO:0080092 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | pollen maturation | regulation of pollen tube growth

Show annotation evidence
eggNOG
Preferred name: AGL104 | Seed ortholog: 337451.A0A443PGH7 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BDo-26, SRF-TF@58023|ij-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa04g2998Pa04g2998.1

…42 | GO:0043565 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | systemic acquired resistance, salicylic acid mediated signaling pathway | defense response to bacterium | sequence-specific DNA b…

Show annotation evidence
eggNOG
Preferred name: TGA1 | Seed ortholog: 337451.A0A3S3QUL8 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|CF-9, bZIP_1@131567|B-2, bZIP_1@35493|AEr-24
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding
KEGG
KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g3003Pa04g3003.1

…34 | GO:2000278 | negative regulation of transcription by RNA polymerase II | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of transcription by RNA polymerase II | transcription by RNA polymerase II | DNA damage respons…

Show annotation evidence
eggNOG
Preferred name: LOC100837384 | Seed ortholog: 337451.A0A3S3MLY1 | COG: S | eggNOG OG: DP@2759|A-1, DP@33090|HU-19, E2F_TDP@131567|Ag-9, E2F_TDP@35493|Rr-23
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006366 transcription by RNA polymerase II; GO:0006974 DNA damage response; GO:0007113 endomitotic cell cycle; GO:0007307...
KEGG
KO: K04683 | Pathway: 03083 | BRITE: 00001, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa04g3005Pa04g3005.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC116214211 | Seed ortholog: 337451.A0A3S3N6T7 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@1437183|AAZ-26, LRR_8@3398|qr-25, NB-ARC@131567|AC-6, NB-ARC@3398|PLY-46, NB-ARC@35493|AQS-21
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13459 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa04g3011Pa04g3011.1

…| K09286 | 00001 | 03000 | AP2_22_64 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: LOC109728009 | Seed ortholog: 337451.A0A443PGI1 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@33090|KL-15, AP2@3398|WL-18, AP2@58023|RX-17
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g0022Pa05g0022.1

…vity | minor groove of adenine-thymine-rich DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription elongation factor activity | transcription coactivator activity | transcription corepressor activity | RNA binding | helicase activity | histone acetyltransferase a…

Show annotation evidence
eggNOG
Preferred name: ATX5 | Seed ortholog: 337451.A0A3S3PTS1 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@2759|C-2!, PHD@3398|Eu-10, PHD_2@131567|A-1*, PHD_2@2759|C-2!, PHD_2@33090|DS-10, PWWP@131567|A-1*, PWWP@2759|FF-11, PWWP@33090|Tv-15, PWWP@3398|ok-18, SET@131567|AUD-18, SET@2759|Azl-20, SET@33090|DWI-26, SET@58023|JYw-34, zf-HC5HC2H_2@131567|A-1*, zf-HC5HC2H_2@2759|BX-8, zf-HC5HC2H_2@3398|ea-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001091 RNA polymerase II general transcription initiation...
KEGG
EC: ec:1.14.11.27, ec:1.14.11.65, ec:1.14.11.66, ec:1.14.11.67, ec:1.14.11.69, ec:2.1.1.354, ec:2.1.1.357, ec:2.1.1.369, ec:2.1.1.37, ec:2.1.1.370, ec:2.1.1.371, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.11.22, ec:2.7.11.23, ec:2.7.4.14, ec:2.8.3.13, ec:3.1.3.16, ec:5.6.2.6, ec:6.1.1.6 | KO: K02603, K02606, K04498, K04567, K06062, K06101, K06672, K06709, K07117, K08819, K08881, K08882, K08883, K09186, K09187, K09188,...
eggNOGGOKEGG
eggNOG-inferred
Pa05g0049Pa05g0049.1

…782 | GO:0090691 | GO:0090709 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | flower development | meristem initiation | primary shoot apical meristem specification | secondary shoot formation | leaf development | lateral root d…

Show annotation evidence
eggNOG
Preferred name: LOC104608163 | Seed ortholog: 337451.A0A3S3RBU4 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|BMV-23, NAM@35493|AE-6, NAM@58023|BrC-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0010014 meristem initiation; GO:0010072 primary shoot apical meristem specification; GO:0010223 secondary shoot formation; GO:0048366 leaf development; GO:0048527 lateral root development; GO:0051782 negative regulation of...
eggNOGGO
eggNOG-inferred
Pa05g0050Pa05g0050.1

Pa05g0050 | Pa05g0050.1 | SRD2 | 337451.A0A3S4PUQ5 | SNAPC3@2759|A-1 | S | K15210 | 00001 | 03021 | SNAPC3_270_489 | GO:0000978 | GO:0000995 | GO:0001006 | GO:0001046 | GO:0003677 | GO:0003681 | GO:0005515 | GO:0005634 | GO:0009301 | GO:0009926 | GO:0009942...

Show annotation evidence
eggNOG
Preferred name: SRD2 | Seed ortholog: 337451.A0A3S4PUQ5 | COG: S | eggNOG OG: SNAPC3@2759|A-1
GO
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003681 bent DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009301 snRNA...
KEGG
KO: K15210 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa05g0051Pa05g0051.1

Pa05g0051 | Pa05g0051.1 | SRD2 | 337451.A0A3S4PUQ5 | SNAPC3@2759|A-1 | S | K15210 | 00001 | 03021 | SNAPC3_270_489 | GO:0000978 | GO:0000995 | GO:0001006 | GO:0001046 | GO:0003677 | GO:0003681 | GO:0005515 | GO:0005634 | GO:0009301 | GO:0009926 | GO:0009942...

Show annotation evidence
eggNOG
Preferred name: SRD2 | Seed ortholog: 337451.A0A3S4PUQ5 | COG: S | eggNOG OG: SNAPC3@2759|A-1
GO
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003681 bent DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009301 snRNA...
KEGG
KO: K15210 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa05g0059Pa05g0059.1

… | postsynapse | glutamatergic synapse | sperm head-tail coupling apparatus | DNA-binding transcription factor binding | protein aggregate center | cytoplasm protein quality control | positive regulation of protein folding | axonemal central apparatus assembly

Show annotation evidence
eggNOG
Preferred name: LOC107918117, LOC108984177 | Seed ortholog: 3635.A0A1U8KL17, 3641.A0A061GF55 | COG: S | eggNOG OG: DnaJ@131567|Cwn-23, DnaJ@1437183|ppM-51, DnaJ@2759|MXw-33, DnaJ@3398|cLH-43, DnaJ@35493|YnB-41, DnaJ@3633|zTv-59, DnaJ_C@131567|B-2, DnaJ_C@3398|CCZ-27, DnaJ_C@35493|ek-18, DnaJ_C@3633|JBG-37
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001534 radial spoke; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575...
KEGG
KO: K09510 | Pathway: 04141, 05164 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa05g0063Pa05g0063.1

…77 | GO:1902584 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | auxin metabolic process | vegetative phase change | abaxial cell fate specification | …

Show annotation evidence
eggNOG
Preferred name: LOC104599494 | Seed ortholog: 337451.A0A443Q3D1 | COG: S | eggNOG OG: Auxin_resp@131567|A-1*, Auxin_resp@2759|B-2, Auxin_resp@3398|Cm-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BCh-24
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009850 auxin metabolic process; GO:0010050 vegetative phase change; GO:0010158 abaxial cell fate specification; GO:0010582 floral meristem...
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa05g0085Pa05g0085.1

…55 | GO:0045893 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | pollen development | positive regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BZIP61 | Seed ortholog: 337451.A0A443Q394 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@1437183|CzN-33, bZIP_1@33090|QU-15, bZIP_1@35493|nR-21
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0045893 positive regulation of DNA-templated transcription
KEGG
KO: K09043 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g0090Pa05g0090.1

…6 | GO:1990837 | DNA-binding transcription activator activity | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | embryo development ending in seed dormancy | leaf senescence | leaf development | coty…

Show annotation evidence
eggNOG
Preferred name: LOC104612105 | Seed ortholog: 337451.A0A3S3R9R9 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|LC-16, TCP@58023|g-6
GO
GO:0001216 DNA-binding transcription activator activity; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy; GO:0010150 leaf senescence; GO:0048366 leaf development; GO:0048825 cotyledon development; GO...
eggNOGGO
eggNOG-inferred
Pa05g0091Pa05g0091.1

…6 | GO:1990837 | DNA-binding transcription activator activity | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | embryo development ending in seed dormancy | leaf senescence | leaf development | coty…

Show annotation evidence
eggNOG
Preferred name: LOC104612105 | Seed ortholog: 337451.A0A3S3R9R9 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|LC-16, TCP@58023|g-6
GO
GO:0001216 DNA-binding transcription activator activity; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy; GO:0010150 leaf senescence; GO:0048366 leaf development; GO:0048825 cotyledon development; GO...
eggNOGGO
eggNOG-inferred
Pa05g0116Pa05g0116.1

…214 | GO:0045892 | GO:1902455 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to iron ion | seed coat development | negative regulation of DNA-templated transcription | negati…

Show annotation evidence
eggNOG
Preferred name: CDF4 | Seed ortholog: 337451.A0A443Q396 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@33090|E-3
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010039 response to iron ion; GO:0010214 seed coat development; GO:0045892 negative regulation of DNA-templated transcription; GO:1902455 negative regulation of stem cell population maintenance
eggNOGGO
eggNOG-inferred
Pa05g0123Pa05g0123.1

…638 | GO:0045893 | GO:1900056 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | signal transduction | circadian rhythm | chloroplast organization | negative regulation of flower development | regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: LOC116202494 | Seed ortholog: 337451.A0A3S3NLF2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@3398|Fqg-39, Myb_DNA-binding@58023|EKH-37
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...
eggNOGGO
eggNOG-inferred

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