Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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Pa03g3811Pa03g3811.1

Pa03g3811 | Pa03g3811.1 | Pa03g3811.2 | LOC104610263 | 337451.A0A3S3MJR1 | 337451.A0A443NGQ7 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | S | ec:2.7.10.2 | K02599 | K05293 | K06867 | K09257 | K10683 | K12491 | K15009 | K17266 | K17512 | K17540 | K17554 | K17566 |...

Show annotation evidence
eggNOG
Preferred name: LOC104610263 | Seed ortholog: 337451.A0A3S3MJR1, 337451.A0A443NGQ7 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K02599, K05293, K06867, K09257, K10683, K12491, K15009, K17266, K17512, K17540, K17554, K17566, K17848, K19626, K20129, K20456, K20994, K20995, K20996, K21411, K21413, K21414, K21415, K21436, K21437, K21441, K21596, K21878, K21952, K25576 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 |...
eggNOGGOKEGG
eggNOG-inferred
Pa03g3816Pa03g3816.1

Pa03g3816 | Pa03g3816.1 | Pa03g3816.2 | LOC104610263 | 337451.A0A3S3MJR1 | 337451.A0A443NGQ7 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | S | ec:2.7.10.2 | K02599 | K05293 | K06867 | K09257 | K10683 | K12491 | K15009 | K17266 | K17512 | K17540 | K17554 | K17566 |...

Show annotation evidence
eggNOG
Preferred name: LOC104610263 | Seed ortholog: 337451.A0A3S3MJR1, 337451.A0A443NGQ7 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K02599, K05293, K06867, K09257, K10683, K12491, K15009, K17266, K17512, K17540, K17554, K17566, K17848, K19626, K20129, K20456, K20994, K20995, K20996, K21411, K21413, K21414, K21415, K21436, K21437, K21441, K21596, K21878, K21952, K25576 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 |...
eggNOGGOKEGG
eggNOG-inferred
Pa03g3820Pa03g3820.1

Pa03g3820 | Pa03g3820.1 | LOC104610263 | 337451.A0A443NGQ7 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | S | ec:2.7.10.2 | K02599 | K05293 | K06867 | K09257 | K10683 | K12491 | K15009 | K17266 | K17512 | K17540 | K17554 | K17566 | K17848 | K19626 | K20129 | K20456...

Show annotation evidence
eggNOG
Preferred name: LOC104610263 | Seed ortholog: 337451.A0A443NGQ7 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K02599, K05293, K06867, K09257, K10683, K12491, K15009, K17266, K17512, K17540, K17554, K17566, K17848, K19626, K20129, K20456, K20994, K20995, K20996, K21411, K21413, K21414, K21415, K21436, K21437, K21441, K21596, K21878, K21952, K25576 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 |...
eggNOGGOKEGG
eggNOG-inferred
Pa03g3827Pa03g3827.1

…O:0005634 | GO:0010090 | GO:0010214 | GO:0010468 | GO:0048354 | DNA binding | DNA-binding transcription factor activity | nucleus | trichome morphogenesis | seed coat development | regulation of gene expression | mucilage biosynthetic process involved in seed coat development

Show annotation evidence
eggNOG
Preferred name: LOC106764421 | Seed ortholog: 337451.A0A3S3MQ78 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|QfD-48, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|FSr-38, Myb_DNA-binding@58023|GOI-39
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0010468 regulation of gene expression; GO:0048354 mucilage biosynthetic process involved in seed coat development
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3902Pa03g3902.1

…316 | GO:0048510 | GO:0055046 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | embryo development ending in seed dormancy | somatic embryogenesis | CCAAT-binding fa…

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eggNOG
Preferred name: NFYA1 | Seed ortholog: 337451.A0A443NGU4 | COG: S | eggNOG OG: CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|AE-10
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0010262 somatic embryogenesis; GO:0016602 CCAAT-binding factor complex; GO:0045892 negative regulation of DNA...
KEGG
KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3916Pa03g3916.1

…832 | GO:1901348 | GO:2000652 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | plant-type secondary cell wall biogenesis | positive regulation of DNA-templated transcription | defense response to fungus | positive regulation of secondary cell wall…

Show annotation evidence
eggNOG
Preferred name: LOC104597428 | Seed ortholog: 337451.A0A3S3NDY8 | COG: S | eggNOG OG: Myb_DNA-binding@131221|LYW-44, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|Mih-45, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UPw-51, Myb_DNA-binding@35493|IIv-41
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:2000652 regulation of secondary cell wall biogenesis
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3949Pa03g3949.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | regulation of nitrogen utilization | response to osmotic stress | circadian rhythm | response …

Show annotation evidence
eggNOG
Preferred name: LOC104603455 | Seed ortholog: 337451.A0A3S3MJX8 | COG: S | eggNOG OG: HLH@131567|pI-16, HLH@58023|AMo-18!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006808 regulation of nitrogen utilization; GO:0006970 response to osmotic stress; GO:0007623 circadian rhythm; GO...
KEGG
KO: K06054, K06055, K09087, K09088, K09089, K09090, K09091 | Pathway: 03460, 04330, 04950, 05165, 05169, 05200, 05224 | BRITE: 00001, 03000, 03019, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa03g3977Pa03g3977.1

…GO:0005634 | GO:0009733 | GO:0009751 | GO:0009753 | GO:0043565 | GO:0045893 | DNA-binding transcription factor activity | protein binding | nucleus | response to auxin | response to salicylic acid | response to jasmonic acid | sequence-specific DNA binding | positive regulation of DNA-templated tran…

Show annotation evidence
eggNOG
Preferred name: TGA10 | Seed ortholog: 337451.A0A443NH09 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Pn-15
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
KEGG
KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3978Pa03g3978.1

…70 | GO:0042762 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | ethylene-activated signaling pathway | cellular response to sulfate starvation | regulation of sulfur meta…

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eggNOG
Preferred name: EIL3 | Seed ortholog: 337451.A0A3S4NIV5 | COG: S | eggNOG OG: EIN3@131567|A-1*, EIN3@35493|J-4
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009873 ethylene-activated signaling pathway; GO:0009970 cellular response to sulfate starvation; GO:0042762 regulation of sulfur metabolic process
KEGG
KO: K14514 | Pathway: 04016, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3982Pa03g3982.1

…ing | ATP-dependent topological DNA co-entrapment activity | lncRNA binding | DNA-binding transcription factor binding

Show annotation evidence
eggNOG
Preferred name: SYN3 | Seed ortholog: 337451.A0A443NGZ5 | COG: S | eggNOG OG: Rad21_Rec8@131567|AQ-7, Rad21_Rec8@33090|YZ-23, Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NV-16, Rad21_Rec8_N@3398|SE-18
GO
GO:0000278 mitotic cell cycle; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009555 pollen development; GO:0009561 megagametogenesis; GO:0019901 protein kinase binding; GO:0043565 sequence...
KEGG
KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa03g3997Pa03g3997.1

…GO:0045893 | GO:0048366 | GO:0048653 | GO:1900426 | GO:2000025 | GO:2000032 | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated tra…

Show annotation evidence
eggNOG
Preferred name: SPL9 | Seed ortholog: 337451.A0A443NH28 | COG: S | eggNOG OG: SBP@131567|A-1*, SBP@3193|AF-7, SBP@33090|I-4
GO
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009409 response to cold; GO:0042127 regulation of cell population proliferation;...
eggNOGGO
eggNOG-inferred
Pa03g4025Pa03g4025.1

Pa03g4025 | Pa03g4025.1 | GOS2 | 56857.A0A200QKT2 | SUI1@131567|A-1 | SUI1@1437183|AdY-25 | SUI1@2759|a-5 | SUI1@3193|aN-18 | SUI1@33090|QI-16 | SUI1@3398|AMf-23 | S | ec:2.3.2.27 | K03113 | 00563 | 01100 | M00065 | 00001 | 03012 | SUI1_28_102 | GO:0001731 ...

Show annotation evidence
eggNOG
Preferred name: GOS2 | Seed ortholog: 56857.A0A200QKT2 | COG: S | eggNOG OG: SUI1@131567|A-1, SUI1@1437183|AdY-25, SUI1@2759|a-5, SUI1@3193|aN-18, SUI1@33090|QI-16, SUI1@3398|AMf-23
GO
GO:0001731 formation of translation preinitiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006413 translational initiation; GO:0006446 regulation of translational...
KEGG
EC: ec:2.3.2.27 | KO: K03113 | Pathway: 00563, 01100 | Module: M00065 | BRITE: 00001, 03012
eggNOGGOKEGG
eggNOG-inferred
Pa03g4032Pa03g4032.1

…634 | GO:0010014 | GO:0010199 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | meristem initiation | organ boundary specification between lateral organs and the meristem

Show annotation evidence
eggNOG
Preferred name: LOC110791689 | Seed ortholog: 337451.A0A3S3MUY4 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|BMV-23, NAM@35493|AE-6, NAM@58023|BrB-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010014 meristem initiation; GO:0010199 organ boundary specification between lateral organs and the meristem
eggNOGGO
eggNOG-inferred
Pa03g4044Pa03g4044.1

…GO:0009867 | GO:0042803 | GO:0048831 | GO:0055062 | GO:0080040 | GO:0140297 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | jasmonic acid mediated signaling pathway | protein homodimerization activity | regulation of s…

Show annotation evidence
eggNOG
Preferred name: LOC104592120 | Seed ortholog: 337451.A0A443NH51 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|DyJ-28, HLH@33090|AAF-17, HLH@35493|Aps-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...
eggNOGGO
eggNOG-inferred
Pa03g4045Pa03g4045.1

…GO:0009867 | GO:0042803 | GO:0048831 | GO:0055062 | GO:0080040 | GO:0140297 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | jasmonic acid mediated signaling pathway | protein homodimerization activity | regulation of s…

Show annotation evidence
eggNOG
Preferred name: LOC104592120 | Seed ortholog: 337451.A0A443NH51 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|DyJ-28, HLH@33090|AAF-17, HLH@35493|Aps-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...
eggNOGGO
eggNOG-inferred
Pa03g4055Pa03g4055.1

Pa03g4055 | Pa03g4055.1 | LOC109706246 | 337451.A0A3S3M6C0 | EIF_2_alpha@131567|A-1 | S1@131567|pX-41 | S1@2759|AIy-47 | COG0195 | K03237 | 04141 | 00001 | 03012 | EIF_2_alpha_130_260 | S1_18_92 | GO:0000423 | GO:0001731 | GO:0002183 | GO:0003729 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC109706246 | Seed ortholog: 337451.A0A3S3M6C0 | COG: COG0195 | eggNOG OG: EIF_2_alpha@131567|A-1, S1@131567|pX-41, S1@2759|AIy-47
GO
GO:0000423 mitophagy; GO:0001731 formation of translation preinitiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003729 mRNA binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005794 Golgi apparatus; GO:0005850 eukaryotic translation initiation factor 2 complex; GO:0005886 plasma membrane; GO:0006412 translation; GO:0006413 translational initiation; GO:0006446 regulation of translational...
KEGG
KO: K03237 | Pathway: 04141 | BRITE: 00001, 03012
eggNOGGOKEGG
eggNOG-inferred
Pa03g4056Pa03g4056.1

Pa03g4056 | Pa03g4056.1 | LOC123059761 | 337451.A0A3S3MZF6 | HSP70@131567|UI-16 | HSP70@3398|ROQ-52 | COG0443 | K04043 | 03018 | 00001 | 03019 | 03029 | 03110 | 04147 | HSP70_50_642 | GO:0001401 | GO:0001405 | GO:0003674 | GO:0003723 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC123059761 | Seed ortholog: 337451.A0A3S3MZF6 | COG: COG0443 | eggNOG OG: HSP70@131567|UI-16, HSP70@3398|ROQ-52
GO
GO:0001401 SAM complex; GO:0001405 PAM complex, Tim23 associated import motor; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005743 mitochondrial inner membrane; GO:0005744 TIM23 mitochondrial import inner membrane translocase complex; GO:0005758 mitochondrial...
KEGG
KO: K04043 | Pathway: 03018 | BRITE: 00001, 03019, 03029, 03110, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa03g4057Pa03g4057.1

Pa03g4057 | Pa03g4057.1 | LOC123059761 | 337451.A0A3S3MZF6 | HSP70@131567|UI-16 | HSP70@3398|ROQ-52 | COG0443 | K04043 | 03018 | 00001 | 03019 | 03029 | 03110 | 04147 | HSP70_50_642 | GO:0001401 | GO:0001405 | GO:0003674 | GO:0003723 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC123059761 | Seed ortholog: 337451.A0A3S3MZF6 | COG: COG0443 | eggNOG OG: HSP70@131567|UI-16, HSP70@3398|ROQ-52
GO
GO:0001401 SAM complex; GO:0001405 PAM complex, Tim23 associated import motor; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005743 mitochondrial inner membrane; GO:0005744 TIM23 mitochondrial import inner membrane translocase complex; GO:0005758 mitochondrial...
KEGG
KO: K04043 | Pathway: 03018 | BRITE: 00001, 03019, 03029, 03110, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa03g4081Pa03g4081.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0005737 | GO:0006355 | GO:0031347 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | regulation of defense response

Show annotation evidence
eggNOG
Preferred name: BHLH93 | Seed ortholog: 337451.A0A3S3NE67 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|LFz-35, HLH@3193|DTB-27, HLH@33090|AAF-17, HLH@35493|Aps-20, HLH@58023|FXH-30
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0031347 regulation of defense response
eggNOGGO
eggNOG-inferred
Pa03g4092Pa03g4092.1

…GO:0009867 | GO:0042803 | GO:0048831 | GO:0055062 | GO:0080040 | GO:0140297 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | jasmonic acid mediated signaling pathway | protein homodimerization activity | regulation of s…

Show annotation evidence
eggNOG
Preferred name: LOC104592120 | Seed ortholog: 337451.A0A3S3MK52 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|DyJ-28, HLH@33090|AAF-17, HLH@35493|Aps-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...
eggNOGGO
eggNOG-inferred
Pa03g4118Pa03g4118.1

…165 | transcription cis-regulatory region binding | cell fate specification | DNA-binding transcription factor activity | protein binding | nucleus | xylem and phloem pattern formation | xylem development | identical protein binding | cell fate commitment

Show annotation evidence
eggNOG
Preferred name: KN1 | Seed ortholog: 337451.A0A3S3Q3D4 | COG: S | eggNOG OG: ELK@131567|A-1*, ELK@33090|C-2, ELK@3398|O-4, Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|AW-8, Homeobox_KN@3398|Sa-17, KNOX1@131567|A-1*, KNOX1@3193|a-6, KNOX1@33090|B-2, KNOX1@3398|y-8, KNOX2@131567|A-1*, KNOX2@3398|m-7, KNOX2@35493|B-2
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001708 cell fate specification; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010051 xylem and phloem pattern formation; GO:0010089 xylem development; GO:0042802 identical protein binding; GO:0045165 cell fate commitment
eggNOGGO
eggNOG-inferred
Pa03g4119Pa03g4119.1

…is-regulatory region binding | DNA-binding transcription repressor activity | DNA-binding transcription factor activity | protein binding | nucleus | response to water deprivation | response to cytokinin | response to abscisic acid | abscisic acid-activated signaling pathway

Show annotation evidence
eggNOG
Preferred name: LOC116198537 | Seed ortholog: 337451.A0A3S4NJ63 | COG: S | eggNOG OG: HALZ@131221|ID-15, HALZ@131567|y-8, HALZ@3398|Pv-17, HALZ@35493|At-10, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|KGJ-34, Homeodomain@3398|XPN-42, Homeodomain@35493|BwP-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001217 DNA-binding transcription repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g4123Pa03g4123.1

…GO:0120195 | GO:1901002 | GO:1901371 | GO:1902074 | GO:1902584 | GO:1990019 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | negative regulation of cell population proliferation | asymmetric cell division | response to cold | response to water depri…

Show annotation evidence
eggNOG
Preferred name: RAX3 | Seed ortholog: 337451.A0A3S3MQM4 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|bOZ-57, Myb_DNA-binding@3193|KPo-43, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|Rnj-49, Myb_DNA-binding@35493|JKf-42, Myb_DNA-binding@58023|Mip-45
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009555 pollen development; GO:0009615 response to virus; GO:0009620 response to fungus; GO:0009646 response to...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g4135Pa03g4135.1

…634 | GO:0006355 | GO:0009637 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to blue light

Show annotation evidence
eggNOG
Preferred name: BHLH74 | Seed ortholog: 337451.A0A443NHE6 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Hds-32, HLH@33090|AbH-19, HLH@3398|Jxo-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009637 response to blue light
eggNOGGO
eggNOG-inferred
Pa03g4137Pa03g4137.1

…37 | GO:1905392 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | gamete generation | maintenance of shoot apical meristem identity | positive regulation of auxin biosynthe…

Show annotation evidence
eggNOG
Preferred name: ANT | Seed ortholog: 337451.A0A443NHC1 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Aps-24, AP2@33090|Xs-18, AP2@3398|GkU-33
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007276 gamete generation; GO:0010492 maintenance of shoot apical meristem identity; GO:0010601 positive regulation of auxin biosynthetic process; GO:0019760 glucosinolate...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g4145Pa03g4145.1

…hibition of non-skeletal tissue mineralization | cAMP/PKA signal transduction | ATF1-ATF4 transcription factor complex | positive regulation of seed maturation

Show annotation evidence
eggNOG
Preferred name: LOC103707533 | Seed ortholog: 337451.A0A3S3NYX8 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@1437183|Dhb-34, bZIP_1@33090|BLk-28, bZIP_1@3398|BcX-29
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0001756 somitogenesis; GO:0002240 response to molecule of oomycetes origin; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005667 transcription regulator complex; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006006 glucose metabolic process; GO:0006355 regulation of DNA-templated...
KEGG
KO: K05870, K09052, K09053, K09060, K25784 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000, 03029
eggNOGGOKEGG
eggNOG-inferred
Pa03g4182Pa03g4182.1

…366 | GO:0055037 | GO:0060586 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | early endosome | late endosome | asymmetric cell division | radial pattern formation | regulation of hormone metabolic process | sequence-…

Show annotation evidence
eggNOG
Preferred name: LOC104609711 | Seed ortholog: 337451.A0A443NHI0 | COG: S | eggNOG OG: GRAS@131567|Ad-10, GRAS@3193|CY-12, GRAS@3398|FR-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005769 early endosome; GO:0005770 late endosome; GO:0008356 asymmetric cell division; GO:0009956 radial pattern formation; GO:0032350 regulation of hormone metabolic process; GO:0043565 sequence-specific DNA binding; GO:0045930...
KEGG
KO: K27743 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g4207Pa03g4207.1

…H_293_333 | GO:0003677 | GO:0003700 | GO:0005634 | GO:0006355 | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

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eggNOG
Preferred name: BHLH84 | Seed ortholog: 337451.A0A3S3NMX9 | COG: S | eggNOG OG: HLH@3398|LS-12, HLH@58023|y-7
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa03g4209Pa03g4209.1

…ence-specific DNA binding | transcription corepressor binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to oxidative stress | response to cold | response to water deprivation | response to wounding | response to high light intensity | response t…

Show annotation evidence
eggNOG
Preferred name: LOC109014213 | Seed ortholog: 337451.A0A443NHI5 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|PA-16
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006979 response to oxidative stress; GO:0009409 response to cold; GO:0009414 response to water...
eggNOGGO
eggNOG-inferred
Pa03g4257Pa03g4257.1

…92 | GO:2001280 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | embryo sac development | endosperm development | pollen tube guidance | vegetative to reproductive phase transition of meris…

Show annotation evidence
eggNOG
Preferred name: MYB98 | Seed ortholog: 337451.A0A3S3M6M8 | eggNOG OG: Myb_DNA-binding@131567|ACl-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0009960 endosperm development; GO:0010183 pollen tube guidance; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010262 somatic embryogenesis; GO...
KEGG
KO: K21769 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

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