Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,385 genes for “transcription factor”

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SelectGeneMatched annotationEvidenceActions
Pa03g3392Pa03g3392.1

Pa03g3392 | Pa03g3392.1 | Pa03g3392.2 | LOC109021170 | 337451.A0A3S3NXX5 | DUF908@2759|A-1 | DUF908@3193|Cv-12 | DUF913@2759|A-1 | DUF913@3193|IL-14 | HECT@131567|A-1* | HECT@2759|ep-22 | HECT@3193|BOF-31 | UBA@131567|Dj-15 | UBA@3193|VH-25 | UBM@131567|G-3...

Show annotation evidence
eggNOG
Preferred name: LOC109021170 | Seed ortholog: 337451.A0A3S3NXX5 | COG: COG2239 | eggNOG OG: DUF908@2759|A-1, DUF908@3193|Cv-12, DUF913@2759|A-1, DUF913@3193|IL-14, HECT@131567|A-1*, HECT@2759|ep-22, HECT@3193|BOF-31, UBA@131567|Dj-15, UBA@3193|VH-25, UBM@131567|G-3, UBM@3193|MG-18
GO
GO:0000139 Golgi membrane; GO:0000209 protein polyubiquitination; GO:0000278 mitotic cell cycle; GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000472 endonucleolytic cleavage...
KEGG
EC: ec:2.3.2.26 | KO: K10592 | Pathway: 04120 | BRITE: 00001, 01000, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa03g3412Pa03g3412.1

…440 | GO:0042803 | GO:0048586 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | stomatal lineage progression | protein homodimerization activity | regulation of long-day photoperiodism, flowering

Show annotation evidence
eggNOG
Preferred name: LOC104595549 | Seed ortholog: 56857.A0A200QI41 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|LF-13, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|CHg-29, SRF-TF@35493|jX-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010440 stomatal lineage progression; GO:0042803 protein homodimerization activity; GO:0048586 regulation of long-day photoperiodism, flowering
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3427Pa03g3427.1

… transcription activator activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | spindle | regulation of DNA-templated transcription | negative regulation of cell population proliferation | phragmoplast | response to fungus | respo…

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eggNOG
Preferred name: MYB3R4 | Seed ortholog: 337451.A0A443NFP6 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524...
KEGG
KO: K09420 | Pathway: 04151, 04218 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3437Pa03g3437.1

…uclear thyroid hormone receptor binding | ubiquitin protein ligase activity | DNA-binding transcription factor binding

Show annotation evidence
eggNOG
Preferred name: MED17 | Seed ortholog: 337451.A0A443NFW0 | COG: S | eggNOG OG: Med17@2759|A-1
GO
GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0003712 transcription coregulator activity; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006974 DNA damage response; GO:0009640 photomorphogenesis; GO:0016592 mediator complex; GO:0035196 miRNA processing; GO:0042809 nuclear vitamin...
KEGG
KO: K15133 | Pathway: 04919 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g3441Pa03g3441.1

…sis I | gamete generation | germ cell development | spermatogenesis | brain development | transcription factor binding | poly(A) binding | biological_process | eukaryotic initiation factor 4E binding | gonad development | JUN kinase binding | extrinsic apoptotic signaling pathway via death domain re…

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eggNOG
Preferred name: RH52 | Seed ortholog: 337451.A0A3S3MYM2 | COG: S | eggNOG OG: DEAD@131567|Fpr-34, DEAD@2759|PnN-44, DEAD@35493|ADZt-58, Helicase_C|82CO8R@131567, Helicase_C|82CO8R@58023
GO
GO:0000390 spliceosomal complex disassembly; GO:0002151 G-quadruplex RNA binding; GO:0002183 cytoplasmic translational initiation; GO:0002753 cytoplasmic pattern recognition receptor signaling pathway; GO:0003677 DNA binding; GO:0003678 DNA helicase activity; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003727 single-stranded RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation...
KEGG
EC: ec:5.6.2.7 | KO: K11594 | Pathway: 03040, 04622, 05161, 05203 | BRITE: 00001, 01000, 03019, 03036, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa03g3457Pa03g3457.1

…GO:0010166 | GO:0042335 | GO:0043565 | GO:0045893 | GO:1902584 | GO:1904278 | DNA-binding transcription factor activity | nucleus | response to osmotic stress | response to water deprivation | response to abscisic acid | ethylene-activated signaling pathway | cutin biosynthetic process | wax metabol…

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eggNOG
Preferred name: WIN1 | Seed ortholog: 337451.A0A443NFV8 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|Nk-16, AP2@33090|Hu-14, AP2@3398|lN-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006970 response to osmotic stress; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009873 ethylene-activated signaling pathway; GO:0010143 cutin biosynthetic process; GO:0010166 wax metabolic process; GO:0042335 cuticle development; GO:0043565 sequence-specific DNA binding; GO:0045893 positive...
eggNOGGO
eggNOG-inferred
Pa03g3477Pa03g3477.1

…944 | GO:1902183 | GO:2000024 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | polarity specification of adaxial/abaxial axis | regulation of shoot apical meristem development | regulat…

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eggNOG
Preferred name: LOC104595406 | Seed ortholog: 337451.A0A443NFW7 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Bl-10
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
KEGG
KO: K25796 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3479Pa03g3479.1

…944 | GO:1902183 | GO:2000024 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | polarity specification of adaxial/abaxial axis | regulation of shoot apical meristem development | regulat…

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eggNOG
Preferred name: LOC104595406 | Seed ortholog: 337451.A0A3S3NDC2 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Bl-10
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
KEGG
KO: K25796 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3485Pa03g3485.1

…bind_10_99 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006970 | GO:0009737 | DNA-binding transcription factor activity | protein binding | nucleus | response to osmotic stress | response to abscisic acid

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eggNOG
Preferred name: HSFC1 | Seed ortholog: 337451.A0A3S3M5G2 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@1437183|AMo-22, HSF_DNA-bind@33090|mg-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006970 response to osmotic stress; GO:0009737 response to abscisic acid
KEGG
KO: K09419 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3496Pa03g3496.1

Pa03g3496 | Pa03g3496.1 | RPL37A | 337451.A0A443NFV3 | Ribosomal_L37e@131567|A-1 | Ribosomal_L37e@58023|OJ-19 | S | K02922 | 03010 | 00001 | 01610 | 03011 | Ribosomal_L37e_3_53 | GO:0000448 | GO:0002181 | GO:0003723 | GO:0003735 | GO:0005634 | GO:0005730 |...

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eggNOG
Preferred name: RPL37A | Seed ortholog: 337451.A0A443NFV3 | COG: S | eggNOG OG: Ribosomal_L37e@131567|A-1, Ribosomal_L37e@58023|OJ-19
GO
GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003735 structural constituent of ribosome; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006412 translation; GO:0006941 striated muscle contraction; GO:0007283...
KEGG
KO: K02922 | Pathway: 03010 | BRITE: 00001, 01610, 03011
eggNOGGOKEGG
eggNOG-inferred
Pa03g3515Pa03g3515.1

…481 | GO:0048444 | GO:0051302 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | regulation of meristem structural organization | guard mother cell cytokinesis | stomatal complex patterning | stomatal line…

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eggNOG
Preferred name: TCX2 | Seed ortholog: 337451.A0A3S3MJ94 | COG: S | eggNOG OG: TCR@131221|Lu-19, TCR@131567|A-1*, TCR@2759|AQ-7!, TCR@3193|OY-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009934 regulation of meristem structural organization; GO:0010235 guard mother cell cytokinesis; GO:0010375 stomatal complex patterning; GO:0010440 stomatal lineage progression; GO:0010481 epidermal cell division; GO:0048444...
KEGG
KO: K21776 | Pathway: 04218, 04814 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g3519Pa03g3519.1

…id binding | DNA binding | minor groove of adenine-thymine-rich DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleoplasm | chromosome | cytoplasm | regulation of DNA-templated transcription | male meiotic nuclear division | male meiosis I | spermatogenesis | …

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eggNOG
Preferred name: TSO1 | Seed ortholog: 337451.A0A3S3MPN5 | COG: S | eggNOG OG: TCR@131567|A-1*, TCR@2759|AQ-7!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000794 condensed nuclear chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0001067 transcription regulatory region nucleic acid binding; GO:0003677 DNA binding; GO:0003680 minor groove of adenine-thymine-rich...
KEGG
KO: K10395, K21776 | Pathway: 04218, 04814 | BRITE: 00001, 04812
eggNOGGOKEGG
eggNOG-inferred
Pa03g3532Pa03g3532.1

Pa03g3532 | Pa03g3532.1 | LOC107962641 | 337451.A0A443NG19 | WD40@131567|BER-20 | WD40@2759|CQc-22 | WD40@3398|AXQv-47 | S | K13137 | 00001 | 03041 | WD40_179_214 | WD40_266_297 | WD40_54_89 | WD40_94_130 | GO:0000122 | GO:0000380 | GO:0000387 | GO:0003723 ...

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eggNOG
Preferred name: LOC107962641 | Seed ortholog: 337451.A0A443NG19 | COG: S | eggNOG OG: WD40@131567|BER-20, WD40@2759|CQc-22, WD40@3398|AXQv-47
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000387 spliceosomal snRNP assembly; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0007476 imaginal disc-derived wing...
KEGG
KO: K13137 | BRITE: 00001, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa03g3535Pa03g3535.1

…optic fissure | histone H3K27me3 reader activity | RNA polymerase II-specific DNA-binding transcription factor binding | histone reader activity | regulation of photoperiodism, flowering

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eggNOG
Preferred name: LOC106759980 | Seed ortholog: 337451.A0A443NG07 | COG: S | eggNOG OG: BAH@131567|A-1*, BAH@1437183|LF-14, BAH@2759|BL-9
GO
GO:0000118 histone deacetylase complex; GO:0001217 DNA-binding transcription repressor activity; GO:0001222 transcription corepressor binding; GO:0001708 cell fate specification; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003713 transcription coactivator activity; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575...
KEGG
EC: ec:2.7.7.7 | KO: K02350 | BRITE: 00001, 01000, 01612, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa03g3542Pa03g3542.1

Pa03g3542 | Pa03g3542.1 | PHN1 | 337451.A0A443NG10 | ArgoL1@131221|dg-18 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@3193|Ahc-27 | ArgoL1@3398|BOC-31 | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@2759|C-2 | ArgoL2@3193|iU-19 ...

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eggNOG
Preferred name: PHN1 | Seed ortholog: 337451.A0A443NG10 | COG: S | eggNOG OG: ArgoL1@131221|dg-18, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@3193|Ahc-27, ArgoL1@3398|BOC-31, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@2759|C-2, ArgoL2@3193|iU-19, ArgoL2@3398|wK-21, ArgoL2@35493|Cr-10, ArgoMid@131567|A-1*, ArgoMid@2759|An-8, ArgoMid@3193|me-23, ArgoMid@3398|vk-26, ArgoN@131221|RT-15,...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa03g3544Pa03g3544.1

…GO:0005634 | GO:0006355 | GO:0009266 | GO:0009740 | GO:0034244 | GO:0048579 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to temperature stimulus | gibberellic acid mediated signaling pathway | negative regulation of tr…

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eggNOG
Preferred name: LOC110804844 | Seed ortholog: 337451.A0A3S3MPP7 | COG: S | eggNOG OG: Myb_DNA-binding@33090|B-2!, Myb_DNA-binding@35493|AH-8
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009266 response to temperature stimulus; GO:0009740 gibberellic acid mediated signaling pathway; GO:0034244 negative regulation of transcription elongation by RNA polymerase II; GO:0048579 negative regulation of long-day photoperiodism, flowering
eggNOGGO
eggNOG-inferred
Pa03g3574Pa03g3574.1

… protein catabolic process | negative regulation of inclusion body assembly | DNA-binding transcription factor binding | cytoplasm protein quality control | positive regulation of protein folding | axonemal central apparatus assembly

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eggNOG
Preferred name: DNAJ1 | Seed ortholog: 337451.A0A443NG39 | COG: S | eggNOG OG: DnaJ@131567|Cwn-23, DnaJ@2759|MXw-33, DnaJ@3398|dxe-44, DnaJ@35493|YnC-41, DnaJ_C@131567|B-2, DnaJ_C@1437183|AbX-23, DnaJ_C@3398|AET-21, DnaJ_C@35493|ej-18
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006413...
KEGG
KO: K09510 | Pathway: 04141, 05164 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa03g3587Pa03g3587.1

…nt organization | positive regulation of transcription by RNA polymerase II | DNA-binding transcription factor binding

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eggNOG
Preferred name: NIG | Seed ortholog: 337451.A0A3S3NDI5 | COG: S | eggNOG OG: ArfGap@131567|A-1*, ArfGap@2759|Cf-9, ArfGap@3398|AeS-22, ArfGap@35493|sF-18
GO
GO:0001675 acrosome assembly; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005930 axoneme; GO:0005935 cellular bud neck; GO:0005938 cell cortex; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006897 endocytosis; GO:0007289...
KEGG
KO: K12486, K12493, K15044, K17969, K20474 | Pathway: 04137, 04144 | BRITE: 00001, 03019, 03029, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa03g3658Pa03g3658.1

…O:0005737 | GO:0008284 | GO:0009733 | GO:0032876 | GO:0042023 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | positive regulation of cell population proliferation | response to auxin | negative regulation of DNA endoreduplication | DNA endoreduplic…

Show annotation evidence
eggNOG
Preferred name: E2FE | Seed ortholog: 337451.A0A443NGA2 | eggNOG OG: E2F_TDP@131567|s-6
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0032876 negative regulation of DNA endoreduplication; GO:0042023 DNA endoreduplication
KEGG
KO: K09391 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3667Pa03g3667.1

…187 | GO:0042802 | GO:0048440 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | circadian rhythm | response to cold | fruit dehiscence | response to red light | fruit development | negative regulation of seed germination | identic…

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eggNOG
Preferred name: SPT | Seed ortholog: 337451.A0A3S3MD39 | COG: S | eggNOG OG: HLH@131221|BVX-22, HLH@131567|Zg-14!, HLH@1437183|LSO-35, HLH@3193|CEo-24, HLH@33090|AbI-19, HLH@35493|AqB-20, HLH@58023|GdX-31
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009409 response to cold; GO:0010047 fruit dehiscence; GO:0010114 response to red light; GO:0010154 fruit development; GO:0010187 negative regulation of seed germination; GO:0042802 identical protein binding; GO:0048440 carpel...
KEGG
KO: K12126 | Pathway: 04075, 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3675Pa03g3675.1

Pa03g3675 | Pa03g3675.1 | LOC108999181 | 337451.A0A3S3NDM2 | Ribosomal_S9@131567|A-1 | Ribosomal_S9@1437183|CKL-32 | S | K02960 | 03010 | 00001 | 01610 | 03011 | Ribosomal_S9_12_144 | GO:0000462 | GO:0002181 | GO:0003723 | GO:0003729 | GO:0003735 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC108999181 | Seed ortholog: 337451.A0A3S3NDM2 | COG: S | eggNOG OG: Ribosomal_S9@131567|A-1, Ribosomal_S9@1437183|CKL-32
GO
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003735 structural constituent of ribosome; GO:0005515 protein binding; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006364...
KEGG
KO: K02960 | Pathway: 03010 | BRITE: 00001, 01610, 03011
eggNOGGOKEGG
eggNOG-inferred
Pa03g3680Pa03g3680.1

…87 | GO:0097548 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | transcription regulator complex | regulation of DNA-templated transcription | response to cold | flower development | regulation of flower development…

Show annotation evidence
eggNOG
Preferred name: AP2 | Seed ortholog: 337451.A0A443NGD6 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@33090|Xr-18, AP2@58023|AYo-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009908 flower development; GO:0009909 regulation of flower development; GO:0010073 meristem maintenance;...
KEGG
KO: K09284 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3693Pa03g3693.1

…515 | GO:0005516 | GO:0005634 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY15 | Seed ortholog: 337451.A0A3S3Q1M9 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|Aw-8, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|N-4, WRKY@131567|A-1*, WRKY@1437183|Agk-26!, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zR-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3706Pa03g3706.1

Pa03g3706 | Pa03g3706.1 | LOC103711950 | 337451.A0A3S3Q2S8 | Arf@131567|AQ-7 | Arf@2759|BGW-24! | Arf@33090|HjO-40 | Arf@3398|Mob-57 | Arf@35493|KDs-46 | S | K07937 | 04144 | 00001 | 04031 | 04131 | 04147 | Arf_6_177 | GO:0000139 | GO:0000281 | GO:0003924 |...

Show annotation evidence
eggNOG
Preferred name: LOC103711950 | Seed ortholog: 337451.A0A3S3Q2S8 | COG: S | eggNOG OG: Arf@131567|AQ-7, Arf@2759|BGW-24!, Arf@33090|HjO-40, Arf@3398|Mob-57, Arf@35493|KDs-46
GO
GO:0000139 Golgi membrane; GO:0000281 mitotic cytokinesis; GO:0003924 GTPase activity; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005765 lysosomal membrane; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum; GO:0007173...
KEGG
KO: K07937 | Pathway: 04144 | BRITE: 00001, 04031, 04131, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa03g3723Pa03g3723.1

…_224_371 | GRAS_412_565 | GO:0003700 | GO:0005634 | GO:0005737 | GO:0006355 | DNA-binding transcription factor activity | nucleus | cytoplasm | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SCL8 | Seed ortholog: 337451.A0A3S3NFG0 | eggNOG OG: GRAS@131567|n-8, GRAS@3193|AY-10, GRAS@3398|BI-11
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K27748 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3746Pa03g3746.1

… | postsynapse | glutamatergic synapse | sperm head-tail coupling apparatus | DNA-binding transcription factor binding | protein aggregate center | cytoplasm protein quality control | positive regulation of protein folding | axonemal central apparatus assembly

Show annotation evidence
eggNOG
Preferred name: LOC107765796 | Seed ortholog: 337451.A0A443NGJ6 | COG: S | eggNOG OG: DnaJ@131567|Cwn-23, DnaJ@2759|MXw-33, DnaJ@3398|dxd-44, DnaJ@35493|YnC-41, DnaJ_C@131567|B-2, DnaJ_C@3398|AEU-21, DnaJ_C@35493|ej-18
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001534 radial spoke; GO:0001671 ATPase activator activity; GO:0002088 lens development in camera-type eye; GO:0002236 detection of misfolded protein; GO:0003341 cilium movement; GO:0003351 epithelial cilium movement involved in extracellular fluid movement; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575...
KEGG
KO: K09510 | Pathway: 04141, 05164 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa03g3762Pa03g3762.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0048658 | GO:0052545 | GO:0055046 | DNA-binding transcription factor activity | protein binding | nucleus | anther wall tapetum development | callose localization | microgametogenesis

Show annotation evidence
eggNOG
Preferred name: RAX3 | Seed ortholog: 337451.A0A3S4NIF6 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|LYY-44, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|JKf-42
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0048658 anther wall tapetum development; GO:0052545 callose localization; GO:0055046 microgametogenesis
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g3765Pa03g3765.1

… | HLH@3398|JyN-34 | S | HLH_171_218 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH79 | Seed ortholog: 337451.A0A443NGL3 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|DVq-27, HLH@33090|AbH-19, HLH@3398|JyN-34
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa03g3802Pa03g3802.1

Pa03g3802 | Pa03g3802.1 | Pa03g3802.2 | BAD1 | 337451.A0A3S3NSR0 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | Ank_5@131567|LD-13 | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3NSR0 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, Ank_5@131567|LD-13, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa03g3807Pa03g3807.1

Pa03g3807 | Pa03g3807.1 | Pa03g3807.2 | BAD1 | 337451.A0A3S3NSR0 | Ank_2@131567|B-2 | Ank_2@2759|H-4! | Ank_5@131567|LD-13 | PGG@131567|A-1* | PGG@33090|Z-5 | S | ec:2.7.10.2 | K21435 | 00563 | 01100 | 01522 | 03440 | 04013 | 04068 | 04144 | 04320 | 04330 |...

Show annotation evidence
eggNOG
Preferred name: BAD1 | Seed ortholog: 337451.A0A3S3NSR0 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|H-4!, Ank_5@131567|LD-13, PGG@131567|A-1*, PGG@33090|Z-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000724 double-strand break repair via homologous recombination; GO:0001554 luteolysis; GO:0001568 blood vessel development; GO:0001701 in utero embryonic development; GO:0001708 cell fate specification; GO:0001709 cell fate determination; GO:0001745 compound eye morphogenesis; GO:0001756 somitogenesis; GO:0001822...
KEGG
EC: ec:2.7.10.2 | KO: K21435 | Pathway: 00563, 01100, 01522, 03440, 04013, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04724, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred

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