Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa02g4887	Pa02g4887`Pa02g4887.1`	… \| cellular response to potassium ion starvation \| seed trichome elongation \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: LOC103715337 \| Seed ortholog: 4432.A0A1U8ALH4 \| COG: S \| eggNOG OG: 14-3-3@131567\|C-2!, 14-3-3@3398\|mZ-42 GO GO:0000325 plant-type vacuole; GO:0003677 DNA binding; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005618 cell wall; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006995 cellular response to nitrogen starvation; GO:0007165 signal transduction; GO:0008426 protein kinase C... KEGG KO: K06630 \| BRITE: 00001, 03400, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4894	Pa02g4894`Pa02g4894.1`	…ng chaperone binding \| misfolded protein binding \| RNA polymerase II-specific DNA-binding transcription factor binding \| secretory vesicle \| protein sequestering activity \| ATP-dependent protein folding chaperone Show annotation evidence eggNOG Preferred name: LOC104598993 \| Seed ortholog: 3750.A0A498IJJ5 \| COG: COG0443 \| eggNOG OG: HSP70@131567\|MV-14, HSP70@35493\|Nbu-48, HSP70@58023\|PJo-50 GO GO:0000304 response to singlet oxygen; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005788 endoplasmic reticulum lumen; GO:0006457 protein folding; GO:0009408 response to heat; GO:0009507 chloroplast; GO:0009860 pollen tube growth; GO:0015450 protein-transporting ATPase activity; GO:0016592 mediator complex; GO:0016887 ATP hydrolysis activity; GO:0019899 enzyme binding;... KEGG EC: ec:3.6.4.10 \| KO: K09490 \| Pathway: 03060, 04141 \| BRITE: 00001, 01000, 03110, 04131, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4900	Pa02g4900`Pa02g4900.1`	…latory region binding \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of flower development Show annotation evidence eggNOG Preferred name: PAN \| Seed ortholog: 337451.A0A3S4NBH1 \| COG: S \| eggNOG OG: DOG1@131567\|A-1*, DOG1@2759\|DM-10, DOG1@3398\|MT-14, bZIP_1@131567\|B-2, bZIP_1@35493\|gW-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009909 regulation of flower development KEGG KO: K14431 \| Pathway: 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4927	Pa02g4927`Pa02g4927.1`	…\| 00001 \| 03000 \| Homeodomain_77_136 \| GO:0003700 \| GO:0005634 \| GO:0099402 \| DNA-binding transcription factor activity \| nucleus \| plant organ development Show annotation evidence eggNOG Preferred name: WOX1 \| Seed ortholog: 337451.A0A3S3MUB7 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@2759\|XV-17!, Homeodomain@33090\|BEn-23, Homeodomain@3398\|FYY-30 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0099402 plant organ development KEGG KO: K09299, K09357, K09378, K09379, K09380, K23560 \| Pathway: 04550, 05202, 05206, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4937	Pa02g4937`Pa02g4937.1`	…GO:0005634 \| GO:0006355 \| GO:0009718 \| GO:0016036 \| GO:0048364 \| GO:0080147 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| anthocyanin-containing compound biosynthetic process \| cellular response to phosphate starvation \| root de… Show annotation evidence eggNOG Preferred name: BHLH30 \| Seed ortholog: 337451.A0A443N907 \| COG: S \| eggNOG OG: HLH@131567\|OW-12, HLH@35493\|Abo-19, HLH@58023\|BHP-21 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0016036 cellular response to phosphate starvation; GO:0048364 root development; GO:0080147 root hair cell development KEGG KO: K09092, K22495 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4956	Pa02g4956`Pa02g4956.1`	Pa02g4956 \| Pa02g4956.1 \| TAF2 \| 337451.A0A3S3M8A4 \| Peptidase_M1@131567\|Ab-7 \| COG0308 \| K03128 \| 03022 \| 00001 \| 01002 \| 03021 \| 03036 \| Peptidase_M1_341_534 \| GO:0000979 \| GO:0005634 \| GO:0006352 \| GO:0006366 \| GO:0006367 \| GO:0009506 \| GO:0009792 \| GO... Show annotation evidence eggNOG Preferred name: TAF2 \| Seed ortholog: 337451.A0A3S3M8A4 \| COG: COG0308 \| eggNOG OG: Peptidase_M1@131567\|Ab-7 GO GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0005634 nucleus; GO:0006352 DNA-templated transcription initiation; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0009506 plasmodesma; GO:0009792 embryo development ending in birth or egg hatching; GO:0016251 RNA polymerase II general transcription initiation factor... KEGG KO: K03128 \| Pathway: 03022 \| BRITE: 00001, 01002, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4958	Pa02g4958`Pa02g4958.1`	…831 \| GO:1902347 \| GO:2000032 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of meristem growth \| secondary shoot formation \| regulation of shoot system development \| respo… Show annotation evidence eggNOG Preferred name: TB1 \| Seed ortholog: 337451.A0A3S3N936 \| COG: S \| eggNOG OG: TCP@131567\|A-1*, TCP@1437183\|Dk-12, TCP@2759\|B-2 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010075 regulation of meristem growth; GO:0010223 secondary shoot formation; GO:0048831 regulation of shoot system development; GO:1902347 response to strigolactone; GO:2000032 regulation of secondary...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4960	Pa02g4960`Pa02g4960.1`	…sduction system \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| transcription regulator complex \| cytoplasm \| cytosol \| regulation of DNA-templated transcription \| circadian rhythm \| response to cold \| response to … Show annotation evidence eggNOG Preferred name: MYB1 \| Seed ortholog: 337451.A0A443N944 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@1437183\|CFV-33, Myb_DNA-binding@35493\|AYj-28 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737... KEGG KO: K09422 \| Pathway: 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4961	Pa02g4961`Pa02g4961.1`	…sduction system \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| transcription regulator complex \| cytoplasm \| cytosol \| regulation of DNA-templated transcription \| circadian rhythm \| response to cold \| response to … Show annotation evidence eggNOG Preferred name: MYB1 \| Seed ortholog: 337451.A0A443N926 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@1437183\|CFV-33, Myb_DNA-binding@35493\|AYj-28 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737... KEGG KO: K09422 \| Pathway: 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4964	Pa02g4964`Pa02g4964.1`	…sduction system \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| transcription regulator complex \| cytoplasm \| cytosol \| regulation of DNA-templated transcription \| circadian rhythm \| response to cold \| response to … Show annotation evidence eggNOG Preferred name: MYB1 \| Seed ortholog: 337451.A0A3S3M0U4 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@1437183\|CFV-33, Myb_DNA-binding@35493\|AYj-28 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737... KEGG KO: K09422 \| Pathway: 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4965	Pa02g4965`Pa02g4965.1`	…sduction system \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| transcription regulator complex \| cytoplasm \| cytosol \| regulation of DNA-templated transcription \| circadian rhythm \| response to cold \| response to … Show annotation evidence eggNOG Preferred name: MYB1 \| Seed ortholog: 337451.A0A443N932 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@1437183\|CFV-33, Myb_DNA-binding@35493\|AYj-28 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737... KEGG KO: K09422 \| Pathway: 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g4973	Pa02g4973`Pa02g4973.1`	…latory region binding \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| nucleus \| L-phenylalanine biosynthetic process \| response to light intensity \| negative regulation of DNA-templated transcription \| positive regulation of DNA-templated transcrip… Show annotation evidence eggNOG Preferred name: LOC104605071 \| Seed ortholog: 337451.A0A3S3PWW1 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|YLB-54, Myb_DNA-binding@3193\|LZe-44, Myb_DNA-binding@33090\|Eca-37 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009094 L-phenylalanine biosynthetic process; GO:0009642 response to light intensity; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5024	Pa02g5024`Pa02g5024.1`	…005737 \| GO:0009736 \| GO:0042802 \| phosphorelay response regulator activity \| DNA-binding transcription factor activity \| protein binding \| cytoplasm \| cytokinin-activated signaling pathway \| identical protein binding Show annotation evidence eggNOG Preferred name: RR21 \| Seed ortholog: 337451.A0A443N987 \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@33090\|Bhp-32, Response_reg\|WPCHNL@131567, Response_reg\|WPCHNL@3193 GO GO:0000156 phosphorelay response regulator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0009736 cytokinin-activated signaling pathway; GO:0042802 identical protein binding KEGG KO: K14491 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5029	Pa02g5029`Pa02g5029.1`	…976 \| GO:0003700 \| GO:0005634 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus Show annotation evidence eggNOG Preferred name: HSFA1 \| Seed ortholog: 337451.A0A443N9C4 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWd-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|AtR-25, HSF_DNA-bind@35493\|uY-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5039	Pa02g5039`Pa02g5039.1`	…802 \| GO:0043565 \| GO:0045893 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| identical protein binding \| sequence-specific DNA binding \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC543178 \| Seed ortholog: 337451.A0A3S3PWZ2 \| COG: S \| eggNOG OG: MFMR@131221\|G-3, MFMR@131567\|A-1, MFMR@3398\|X-5, MFMR_assoc@131567\|A-1, MFMR_assoc@3398\|L-4, bZIP_1@131567\|Ac-7, bZIP_1@3398\|wD-22 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K09060 \| Pathway: 04011 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5041	Pa02g5041`Pa02g5041.1`	…788 \| GO:0019760 \| GO:0046982 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| negative regulation of abscisic acid-activated signaling pathway \| glucosinolate metabolic process \| prote… Show annotation evidence eggNOG Preferred name: ZFP4 \| Seed ortholog: 337451.A0A3S3N985 \| COG: S \| eggNOG OG: UNK.1LYX@131567\|A-1*, UNK.1LYX@1437183\|Eg-11, UNK.1LYX@3398\|z-6, UNK.1LYX@58023\|C-2 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0019760 glucosinolate metabolic process; GO:0046982 protein heterodimerization activity	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5049	Pa02g5049`Pa02g5049.1`	Pa02g5049 \| Pa02g5049.1 \| LOC107931032 \| 337451.A0A3S3M0Y7 \| G-alpha@131567\|A-1* \| G-alpha@2759\|C-2! \| G-alpha@3398\|GF-16 \| S \| ec:3.1.3.16 \| K04293 \| K04346 \| K04534 \| K04535 \| K04630 \| K04631 \| K04632 \| K04633 \| K04634 \| K04635 \| K04636 \| K04637 \| K04639 ... Show annotation evidence eggNOG Preferred name: LOC107931032 \| Seed ortholog: 337451.A0A3S3M0Y7 \| COG: S \| eggNOG OG: G-alpha@131567\|A-1*, G-alpha@2759\|C-2!, G-alpha@3398\|GF-16 GO GO:0000035 acyl binding; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000132 establishment of mitotic spindle orientation; GO:0000139 Golgi membrane; GO:0000165 MAPK cascade; GO:0000287 magnesium ion binding; GO:0000578 embryonic axis specification; GO:0000742 karyogamy involved in conjugation with cellular fusion; GO:0000743 nuclear migration involved in conjugation with cellular... KEGG EC: ec:3.1.3.16 \| KO: K04293, K04346, K04534, K04535, K04630, K04631, K04632, K04633, K04634, K04635, K04636, K04637, K04639, K04640, K13049, K15441, K17500, K18468, K19729, K19860 \| Pathway: 01522, 04010, 04011, 04015, 04020, 04022, 04024, 04062, 04068, 04071, 04072, 04080, 04113, 04144, 04261, 04270, 04360, 04361, 04371, 04540, 04611, 04670, 04713, 04714, 04720, 04723, 04724, 04725, 04726, 04727, 04728, 04730,...	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5055	Pa02g5055`Pa02g5055.1`	… UNK.21EV@2759\|AB-8 \| S \| GO:0003700 \| GO:0005634 \| GO:0010158 \| GO:0010229 \| DNA-binding transcription factor activity \| nucleus \| abaxial cell fate specification \| inflorescence development Show annotation evidence eggNOG Preferred name: LOC104586306 \| Seed ortholog: 337451.A0A443N9B2 \| COG: S \| eggNOG OG: UNK.21EV@131567\|A-1*, UNK.21EV@2759\|AB-8 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010158 abaxial cell fate specification; GO:0010229 inflorescence development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5081	Pa02g5081`Pa02g5081.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104599110 \| Seed ortholog: 337451.A0A3S3MDS2 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@3398\|jP-24, NB-ARC@131567\|AC-6, NB-ARC@1437183\|ERq-33, NB-ARC@3398\|CSM-29, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5098	Pa02g5098`Pa02g5098.1`	…_bind@3398\|K-4 \| S \| GAGA_bind_1_284 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BBR \| Seed ortholog: 337451.A0A443N9H0 \| COG: S \| eggNOG OG: GAGA_bind@131567\|A-1*, GAGA_bind@3193\|B-2, GAGA_bind@3398\|K-4 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5099	Pa02g5099`Pa02g5099.1`	…091 \| GO:0030154 \| GO:0048497 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| plant-type cell wall loosening \| trichome branching \| cell differentiation \| maintenance of floral organ identity Show annotation evidence eggNOG Preferred name: HDG11 \| Seed ortholog: 337451.A0A3S4NBX2 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@35493\|CIj-25, START@131567\|e-5, START@2759\|CM-9!, START@3398\|ABq-20, START@35493\|Xd-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009828 plant-type cell wall loosening; GO:0010091 trichome branching; GO:0030154 cell differentiation; GO:0048497 maintenance of floral organ identity KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5123	Pa02g5123`Pa02g5123.1`	…74 \| GO:2000652 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to water deprivation \| response to abscisic acid \| plant-type secondary cell wall biogenesis \| negative regulation of secondary cell wall bio… Show annotation evidence eggNOG Preferred name: LOC104611090 \| Seed ortholog: 337451.A0A443N9D7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhB-29, Myb_DNA-binding@33090\|IFL-41, Myb_DNA-binding@3398\|JGJ-42 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009834 plant-type secondary cell wall biogenesis; GO:1901347 negative regulation of secondary cell wall biogenesis; GO:1901348 positive regulation of... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5135	Pa02g5135`Pa02g5135.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| transcription coregulator binding \| transcription corepressor binding \| transcription coactivato… Show annotation evidence eggNOG Preferred name: HB11 \| Seed ortholog: 337451.A0A3S3N9C2 \| COG: S \| eggNOG OG: HALZ@131567\|y-8, HALZ@3193\|Be-11, HALZ@3398\|fC-19, HALZ@35493\|Au-10, HD-ZIP_N@131567\|A-1*, HD-ZIP_N@3193\|y-12, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|QMa-38, Homeodomain@3398\|bFR-44, Homeodomain@35493\|BwP-25 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5165	Pa02g5165`Pa02g5165.1`	Pa02g5165 \| Pa02g5165.1 \| LOC101244604 \| 337451.A0A3S4NNE8 \| KH_2@131567\|O-5 \| KH_2@1437183\|KPO-47 \| Ribosomal_S3_C@131567\|A-1 \| Ribosomal_S3_C@35493\|fr-21 \| S \| ec:2.3.1.16 \| K02985 \| 03010 \| M00087 \| M00113 \| M00861 \| 00001 \| 01610 \| 03011 \| KH_2_20_93 \|... Show annotation evidence eggNOG Preferred name: LOC101244604 \| Seed ortholog: 337451.A0A3S4NNE8 \| COG: S \| eggNOG OG: KH_2@131567\|O-5, KH_2@1437183\|KPO-47, Ribosomal_S3_C@131567\|A-1, Ribosomal_S3_C@35493\|fr-21 GO GO:0000054 ribosomal subunit export from nucleus; GO:0000056 ribosomal small subunit export from nucleus; GO:0000278 mitotic cell cycle; GO:0000325 plant-type vacuole; GO:0002181 cytoplasmic translation; GO:0003729 mRNA binding; GO:0003735 structural constituent of ribosome; GO:0005730 nucleolus; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006281 DNA repair; GO:0006284 base-excision repair; GO:0006412... KEGG EC: ec:2.3.1.16 \| KO: K02985 \| Pathway: 03010 \| Module: M00087, M00113, M00861 \| BRITE: 00001, 01610, 03011	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5174	Pa02g5174`Pa02g5174.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006633 \| GO:0006970 \| GO:0010023 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| fatty acid biosynthetic process \| response to osmotic stress \| proanthocyanidin biosynthetic process Show annotation evidence eggNOG Preferred name: LOC107908226 \| Seed ortholog: 337451.A0A3S4NC17 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|JLw-42 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5175	Pa02g5175`Pa02g5175.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006633 \| GO:0006970 \| GO:0010023 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| fatty acid biosynthetic process \| response to osmotic stress \| proanthocyanidin biosynthetic process Show annotation evidence eggNOG Preferred name: LOC107908226 \| Seed ortholog: 337451.A0A3S3MEZ0 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|JLw-42 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5176	Pa02g5176`Pa02g5176.1`	…GO:0045892 \| GO:0045893 \| GO:0048481 \| GO:0048629 \| GO:0090377 \| GO:0090378 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| trichome morphogenesis \| sequence-specific DNA binding \| negative regulation of DNA-templated transcription \| positive regul… Show annotation evidence eggNOG Preferred name: LOC108994334 \| Seed ortholog: 337451.A0A3S3M8M1 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|IJi-41, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|HJx-40 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010090 trichome morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0048481 plant ovule development; GO:0048629 trichome patterning; GO:0090377 seed... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa02g5186	Pa02g5186`Pa02g5186.1`	…27744 \| 00001 \| 03000 \| GRAS_145_546 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: NSP1 \| Seed ortholog: 337451.A0A3S3MUQ4 \| COG: S \| eggNOG OG: GRAS@131567\|Ad-10, GRAS@3193\|Dc-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K27744 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g0039	Pa03g0039`Pa03g0039.1`	…57 \| GO:2000306 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| transcription coregulator activity \| protein binding \| nucleus \| nucleolus \| cytoplasm \| regulation of DNA-templated transcription \| circadian rhythm \| biological_process \| zinc … Show annotation evidence eggNOG Preferred name: COL2 \| Seed ortholog: 4432.A0A1U8AZA9 \| COG: S \| eggNOG OG: zf-B_box@2759\|B-2!, zf-B_box@3193\|BZ-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0008150 biological_process; GO:0008270 zinc ion binding;... KEGG KO: K12135 \| Pathway: 04712 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g0041	Pa03g0041`Pa03g0041.1`	…GO:0009867 \| GO:0042803 \| GO:0048831 \| GO:0055062 \| GO:0080040 \| GO:0140297 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| jasmonic acid mediated signaling pathway \| protein homodimerization activity \| regulation of s… Show annotation evidence eggNOG Preferred name: LOC104609081 \| Seed ortholog: 337451.A0A443N9P0 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|DyJ-28, HLH@33090\|AAF-17, HLH@35493\|Aps-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0042803 protein homodimerization activity; GO:0048831 regulation of shoot system development; GO:0055062 phosphate ion homeostasis; GO:0080040 positive regulation of cellular response...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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