Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
PaHa11g02740PaHa11g02740.1

…O:0010091 | GO:0031542 | GO:0090628 | cell fate specification | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | jasmonic acid mediated signaling pathway | trichome differentiation | trichome branching | positive regula…

Show annotation evidence
eggNOG
Preferred name: GL3 | Seed ortholog: 337451.A0A443PLU8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Jox-34, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ab-9, bHLH-MYC_N@33090|r-7, bHLH-MYC_N@3398|Ci-12
GO
GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009867 jasmonic acid mediated signaling pathway; GO:0010026 trichome differentiation; GO:0010091 trichome branching; GO:0031542 positive regulation of anthocyanin biosynthetic process; GO:0090628...
eggNOGGO
eggNOG-inferred
PaHa11g02750PaHa11g02750.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MXQ6 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g02760PaHa11g02760.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3MXQ6 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g02810PaHa11g02810.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g02850PaHa11g02850.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03060PaHa11g03060.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03080PaHa11g03080.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03140PaHa11g03140.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03170PaHa11g03170.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03190PaHa11g03190.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03230PaHa11g03230.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3NBB2 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03340PaHa11g03340.1

PaHa11g03340 | PaHa11g03340.1 | LOC101498011 | 3818.A0A444ZYV6 | C2@131567|F-3 | C2@1437183|Cxl-21 | C2@2759|w-6 | C2@35493|ABN-15 | GSHPx@131567|JS-19 | GSHPx@2231393|HWA-57 | GSHPx@3398|FcR-49 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 |...

Show annotation evidence
eggNOG
Preferred name: LOC101498011 | Seed ortholog: 3818.A0A444ZYV6 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|Cxl-21, C2@2759|w-6, C2@35493|ABN-15, GSHPx@131567|JS-19, GSHPx@2231393|HWA-57, GSHPx@3398|FcR-49, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005739 mitochondrion; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation of cell population proliferation; GO:0008542 visual learning; GO...
KEGG
EC: ec:1.11.1.9 | KO: K00432 | Pathway: 00480, 01100 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03350PaHa11g03350.1

PaHa11g03350 | PaHa11g03350.1 | FTIP1 | 337451.A0A3S3PJB1 | C2@131567|F-3 | C2@1437183|BQW-18! | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: FTIP1 | Seed ortholog: 337451.A0A3S3PJB1 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|BQW-18!, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03360PaHa11g03360.1

PaHa11g03360 | PaHa11g03360.1 | FTIP1 | 337451.A0A3S3NBF7 | C2@131567|F-3 | C2@1437183|BQW-18! | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: FTIP1 | Seed ortholog: 337451.A0A3S3NBF7 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|BQW-18!, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03370PaHa11g03370.1

PaHa11g03370 | PaHa11g03370.1 | FTIP1 | 337451.A0A3S3NBF7 | C2@131567|F-3 | C2@1437183|BQW-18! | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: FTIP1 | Seed ortholog: 337451.A0A3S3NBF7 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|BQW-18!, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03430PaHa11g03430.1

PaHa11g03430 | PaHa11g03430.1 | FTIP1 | 337451.A0A3S3NBF7 | C2@131567|F-3 | C2@1437183|BQW-18! | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: FTIP1 | Seed ortholog: 337451.A0A3S3NBF7 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|BQW-18!, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03460PaHa11g03460.1

PaHa11g03460 | PaHa11g03460.1 | BnaCnng28020D | 56857.A0A200QUE0 | C2@131567|F-3 | C2@1437183|Cxl-21 | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 |...

Show annotation evidence
eggNOG
Preferred name: BnaCnng28020D | Seed ortholog: 56857.A0A200QUE0 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|Cxl-21, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005739 mitochondrion; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation of cell population proliferation; GO:0008542 visual learning; GO...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03590PaHa11g03590.1

…GO:0005515 | GO:0005634 | GO:0009639 | GO:0010018 | GO:0016607 | GO:0045893 | DNA-binding transcription factor activity | protein binding | nucleus | response to red or far red light | far-red light signaling pathway | nuclear speck | positive regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LAF1 | Seed ortholog: 337451.A0A3S3QYY0 | COG: S | eggNOG OG: Myb_DNA-binding@131221|JKd-42, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|IIv-41
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009639 response to red or far red light; GO:0010018 far-red light signaling pathway; GO:0016607 nuclear speck; GO:0045893 positive regulation of DNA-templated transcription
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03650PaHa11g03650.1

… Myb_DNA-binding_67_112 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009909 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of flower development

Show annotation evidence
eggNOG
Preferred name: MYB4 | Seed ortholog: 337451.A0A3S4PL63 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|IJR-41, Myb_DNA-binding@33090|Eca-37
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009909 regulation of flower development
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g03900PaHa11g03900.1

…95 | GO:0010097 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | specification of floral organ identity | specification of petal identity | specification of stamen identity

Show annotation evidence
eggNOG
Preferred name: PI | Seed ortholog: 337451.A0A3S3PJG8 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|B-2, K-box@3398|U-5, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|so-21, SRF-TF@3398|AqI-25, SRF-TF@35493|bP-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0010093 specification of floral organ identity; GO:0010095 specification of petal identity; GO:0010097 specification of stamen identity
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g04610PaHa11g04610.1

…-9 | SBP@33090|m-6 | S | SBP_135_208 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SPL1 | Seed ortholog: 337451.A0A443PE63 | COG: S | eggNOG OG: SBP@131567|A-1*, SBP@3193|DH-9, SBP@33090|m-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
PaHa11g04960PaHa11g04960.1

…150 | GO:0045893 | GO:2000377 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to high light intensity | drought recovery | regulation of flavonoid biosynthetic process | leaf senescence | positive regulation of DNA-templated transcriptio…

Show annotation evidence
eggNOG
Preferred name: NAC078 | Seed ortholog: 337451.A0A3S3N460 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0045893 positive regulation of DNA-templated transcription; GO:2000377 regulation of reactive oxygen species metabolic process
eggNOGGO
eggNOG-inferred
PaHa11g05090PaHa11g05090.1

…O:0048577 | GO:0060862 | GO:0060867 | GO:0071365 | GO:2000692 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | embryo development ending in seed dormancy | negative regulation of flower development | fruit dehiscence | floral organ abscission | soma…

Show annotation evidence
eggNOG
Preferred name: AGL15 | Seed ortholog: 4432.A0A1U8B1F1 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|DZ-10, K-box@35493|V-5, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|APG-23
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009793 embryo development ending in seed dormancy; GO:0009910 negative regulation of flower development; GO:0010047 fruit dehiscence; GO:0010227 floral organ abscission; GO:0010262 somatic embryogenesis; GO:0010629 negative regulation of gene expression; GO:0042803...
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05110PaHa11g05110.1

…ay | regulation of miRNA-mediated gene silencing | RNA polymerase II-specific DNA-binding transcription factor binding | ubiquitin protein ligase activity | NEDD8 ligase activity | cellular response to chemical stress | protein K63-linked ubiquitination | protein K48-linked ubiquitination | protein …

Show annotation evidence
eggNOG
Preferred name: RBX1 | Seed ortholog: 337451.A0A443PMH2 | COG: S | eggNOG OG: zf-rbx1@131567|Gg-12, zf-rbx1@2759|IE-13!
GO
GO:0000045 autophagosome assembly; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000109 nucleotide-excision repair complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000151 ubiquitin ligase complex; GO:0000165 MAPK cascade; GO:0000209 protein polyubiquitination; GO:0000409 regulation of transcription by galactose; GO:0000423...
KEGG
EC: ec:2.3.2.32 | KO: K03358, K03868, K10611 | Pathway: 03420, 04066, 04110, 04111, 04114, 04120, 04141, 04310, 04341, 04350, 04710, 05131, 05170, 05200, 05211 | BRITE: 00001, 01000, 03036, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05120PaHa11g05120.1

…ay | regulation of miRNA-mediated gene silencing | RNA polymerase II-specific DNA-binding transcription factor binding | ubiquitin protein ligase activity | NEDD8 ligase activity | cellular response to chemical stress | protein K63-linked ubiquitination | protein K48-linked ubiquitination | protein …

Show annotation evidence
eggNOG
Preferred name: RBX1 | Seed ortholog: 337451.A0A443PMH2 | COG: S | eggNOG OG: zf-rbx1@131567|Gg-12, zf-rbx1@2759|IE-13!
GO
GO:0000045 autophagosome assembly; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000109 nucleotide-excision repair complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000151 ubiquitin ligase complex; GO:0000165 MAPK cascade; GO:0000209 protein polyubiquitination; GO:0000409 regulation of transcription by galactose; GO:0000423...
KEGG
EC: ec:2.3.2.32 | KO: K03358, K03868, K10611 | Pathway: 03420, 04066, 04110, 04111, 04114, 04120, 04141, 04310, 04341, 04350, 04710, 05131, 05170, 05200, 05211 | BRITE: 00001, 01000, 03036, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05170PaHa11g05170.1

…ay | regulation of miRNA-mediated gene silencing | RNA polymerase II-specific DNA-binding transcription factor binding | ubiquitin protein ligase activity | NEDD8 ligase activity | cellular response to chemical stress | protein K63-linked ubiquitination | protein K48-linked ubiquitination | protein …

Show annotation evidence
eggNOG
Preferred name: RBX1 | Seed ortholog: 337451.A0A443PMH2 | COG: S | eggNOG OG: zf-rbx1@131567|Gg-12, zf-rbx1@2759|IE-13!
GO
GO:0000045 autophagosome assembly; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000109 nucleotide-excision repair complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000151 ubiquitin ligase complex; GO:0000165 MAPK cascade; GO:0000209 protein polyubiquitination; GO:0000409 regulation of transcription by galactose; GO:0000423...
KEGG
EC: ec:2.3.2.32 | KO: K03358, K03868, K10611 | Pathway: 03420, 04066, 04110, 04111, 04114, 04120, 04141, 04310, 04341, 04350, 04710, 05131, 05170, 05200, 05211 | BRITE: 00001, 01000, 03036, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05340PaHa11g05340.1

…01 | 03000 | AP2_86_141 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0005737 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm

Show annotation evidence
eggNOG
Preferred name: LOC103721225 | Seed ortholog: 337451.A0A443PMI2 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Bfi-26, AP2@33090|Xs-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05360PaHa11g05360.1

…_6@3398|BAm-25 | S | zf-C2H2_6_55_79 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC109010029 | Seed ortholog: 29760.F6HL78 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|DNj-30, zf-C2H2_6@3193|vX-21, zf-C2H2_6@3398|BAm-25
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
PaHa11g05460PaHa11g05460.1

PaHa11g05460 | PaHa11g05460.1 | AGO5 | 337451.A0A3S3N5W9 | ArgoL1@131221|jP-19 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@2759|C-2 | ArgoL2@3193|LN-14 | ArgoL2@35493|Cr-10 | ArgoMid...

Show annotation evidence
eggNOG
Preferred name: AGO5 | Seed ortholog: 337451.A0A3S3N5W9 | COG: S | eggNOG OG: ArgoL1@131221|jP-19, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@2759|C-2, ArgoL2@3193|LN-14, ArgoL2@35493|Cr-10, ArgoMid@131567|A-1*, ArgoMid@2759|An-8, ArgoMid@3193|Mc-15, ArgoN@131221|RT-15, ArgoN@131567|A-1*, ArgoN@2759|C-2!, ArgoN@3193|Ws-16, ArgoN@35493|Dl-11, PAZ@131221...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g05470PaHa11g05470.1

PaHa11g05470 | PaHa11g05470.1 | MEL1 | 3469.A0A4Y7KX12 | ArgoL1@131221|jP-19 | ArgoL1@131567|A-1* | ArgoL1@2759|C-2! | ArgoL1@35493|MZ-14 | ArgoL2@131221|Ii-13 | ArgoL2@131567|A-1* | ArgoL2@1437183|iM-19 | ArgoL2@2759|C-2 | ArgoL2@3193|LN-14 | ArgoL2@35493...

Show annotation evidence
eggNOG
Preferred name: MEL1 | Seed ortholog: 3469.A0A4Y7KX12 | COG: S | eggNOG OG: ArgoL1@131221|jP-19, ArgoL1@131567|A-1*, ArgoL1@2759|C-2!, ArgoL1@35493|MZ-14, ArgoL2@131221|Ii-13, ArgoL2@131567|A-1*, ArgoL2@1437183|iM-19, ArgoL2@2759|C-2, ArgoL2@3193|LN-14, ArgoL2@35493|Cr-10, ArgoN@131221|RT-15, ArgoN@131567|A-1*, ArgoN@2759|C-2!, ArgoN@3193|Ws-16, ArgoN@35493|Dl-11, PAZ@131221|bB-23, PAZ@131567|A-1*, PAZ@2759|o-7!,...
GO
GO:0000340 RNA 7-methylguanosine cap binding; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II complex binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003725 double-stranded RNA binding; GO:0003727 single-stranded RNA...
KEGG
KO: K11593 | Pathway: 04320, 04361 | BRITE: 00001, 03019, 03036
eggNOGGOKEGG
eggNOG-inferred

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