Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa08g00960	PaHa08g00960`PaHa08g00960.1`	…GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009944 \| GO:0048440 \| GO:0048481 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| polarity specification of adaxial/abaxial axis \| carpel development \| plant ovule development Show annotation evidence eggNOG Preferred name: KAN2 \| Seed ortholog: 337451.A0A3S3NVB7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|dl-20, Myb_DNA-binding@1437183\|JmK-43, Myb_DNA-binding@2759\|pK-22, Myb_DNA-binding@3193\|App-30, Myb_DNA-binding@33090\|Adt-29, Myb_DNA-binding@3398\|DZh-36, Myb_DNA-binding@58023\|Bsd-33 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0048440 carpel development; GO:0048481 plant ovule development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g00980	PaHa08g00980`PaHa08g00980.1`	…GO:0042393 \| GO:0045814 \| GO:0048571 \| GO:0048577 \| GO:0048579 \| GO:0071558 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to temperature stimulus \| histone demethylase activity \| histone binding \| negative regulation of gene expression, … Show annotation evidence eggNOG Preferred name: LOC107808546 \| Seed ortholog: 337451.A0A443P974 \| COG: S \| eggNOG OG: JmjC@131567\|Ae-7, JmjC@2759\|IC-12!, JmjC@33090\|Xb-17, JmjC@58023\|Adw-25, JmjN@131567\|A-1, JmjN@2759\|U-5!, JmjN@33090\|BQ-10, JmjN@3398\|FO-14, zf-C5HC2@131567\|A-1, zf-C5HC2@2759\|C-2!, zf-C5HC2@3398\|Fx-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009266 response to temperature stimulus; GO:0032452 histone demethylase activity; GO:0042393 histone binding; GO:0045814 negative regulation of gene expression, epigenetic; GO:0048571 long-day photoperiodism; GO:0048577 negative regulation of short-day photoperiodism, flowering; GO... KEGG EC: ec:1.14.11.66, ec:1.14.11.67, ec:1.14.11.69 \| KO: K06709, K11446, K11478 \| Pathway: 03083, 04550 \| BRITE: 00001, 01000, 01009, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g00990	PaHa08g00990`PaHa08g00990.1`	…RT_282_507 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0008150 \| GO:0048497 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| biological_process \| maintenance of floral organ identity Show annotation evidence eggNOG Preferred name: ROC3 \| Seed ortholog: 337451.A0A3S3N8F3 \| COG: S \| eggNOG OG: Homeodomain@131567\|Fe-12, Homeodomain@35493\|Cjy-26, START@131567\|e-5, START@2759\|CM-9!, START@3398\|eG-17, START@35493\|Xd-16 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0048497 maintenance of floral organ identity KEGG KO: K09338 \| Pathway: 04814 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01040	PaHa08g01040`PaHa08g01040.1`	…O:0003677 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009408 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat Show annotation evidence eggNOG Preferred name: HSFA1 \| Seed ortholog: 337451.A0A3S3QNR9 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWd-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|BEb-26, HSF_DNA-bind@35493\|uY-20 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01050	PaHa08g01050`PaHa08g01050.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: MYB39 \| Seed ortholog: 337451.A0A443P999 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|HJd-40, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@35493\|GNw-39, Myb_DNA-binding@58023\|MjA-45! GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01170	PaHa08g01170`PaHa08g01170.1`	…68 \| GO:2000652 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| calcium ion binding \| protein binding \| nucleus \| regulation of DNA-templated transcription \| defense response \| response to desiccation \| response to wounding \| response to salt… Show annotation evidence eggNOG Preferred name: MYC2 \| Seed ortholog: 337451.A0A443P995 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|EiQ-29, HLH@33090\|AAF-17, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|SF-17!, bHLH-MYC_N@33090\|Y-5 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006952 defense response; GO:0009269 response to desiccation; GO:0009611 response to wounding; GO:0009651 response to salt stress; GO:0009718... KEGG KO: K13422 \| Pathway: 04016, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01300	PaHa08g01300`PaHa08g01300.1`	…KY_203_259 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009832 \| GO:0043565 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| plant-type cell wall biogenesis \| sequence-specific DNA binding Show annotation evidence eggNOG Preferred name: WRKY12 \| Seed ortholog: 337451.A0A3S3PBP6 \| COG: S \| eggNOG OG: WRKY@131567\|A-1*, WRKY@2759\|VE-17, WRKY@3398\|fr-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009832 plant-type cell wall biogenesis; GO:0043565 sequence-specific DNA binding KEGG EC: ec:2.4.1.260 \| KO: K03847 \| Pathway: 00510, 00513, 01100 \| Module: M00055 \| BRITE: 00001, 01000, 01003	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01310	PaHa08g01310`PaHa08g01310.1`	…s-regulatory region binding \| cell fate determination \| heart morphogenesis \| DNA-binding transcription factor activity \| nucleus \| chromatin remodeling \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| antennal development \| apposition of dorsal and ve… Show annotation evidence eggNOG Preferred name: LOC110781782 \| Seed ortholog: 337451.A0A3S3MPD9 \| COG: S \| eggNOG OG: ASXH@2759\|A-1, GATA@131567\|A-1*, GATA@2759\|Cp-10 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0001709 cell fate determination; GO:0003007 heart morphogenesis; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of... KEGG KO: K09184, K11471, K11648, K11770, K14972, K23407 \| Pathway: 03082, 03083, 03250 \| BRITE: 00001, 01009, 03000, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01830	PaHa08g01830`PaHa08g01830.1`	…A polymerase II \| endothelial tube morphogenesis \| RNA polymerase II-specific DNA-binding transcription factor binding \| protein-containing complex assembly \| extracellular exosome \| cellular response to xenobiotic stimulus \| symbiont-mediated disruption of host cell PML body \| ciliary plasm \| liver… Show annotation evidence eggNOG Preferred name: CKB1 \| Seed ortholog: 337451.A0A443P9C5 \| COG: S \| eggNOG OG: CK_II_beta@131567\|A-1*, CK_II_beta@2759\|O-5 GO GO:0000028 ribosomal small subunit assembly; GO:0000785 chromatin; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0004674 protein serine/threonine kinase activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829... KEGG KO: K03115 \| Pathway: 03008, 03083, 04712 \| BRITE: 00001, 03009, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g01940	PaHa08g01940`PaHa08g01940.1`	…GO:0005634 \| GO:0009611 \| GO:0009789 \| GO:0043565 \| GO:0051301 \| GO:0071365 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to wounding \| positive regulation of abscisic acid-activated signaling pathway \| sequence-specific DNA binding \| cell division \| cellular res… Show annotation evidence eggNOG Preferred name: NAC74 \| Seed ortholog: 337451.A0A3S3NGV9 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@1437183\|Bdq-24, NAM@3193\|pA-16, NAM@3398\|Abs-20, NAM@35493\|AE-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0043565 sequence-specific DNA binding; GO:0051301 cell division; GO:0071365 cellular response to auxin stimulus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02090	PaHa08g02090`PaHa08g02090.1`	…orphogenesis \| sinoatrial valve morphogenesis \| cardiac ventricle formation \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| humoral immune response \|… Show annotation evidence eggNOG Preferred name: AGL84 \| Seed ortholog: 337451.A0A3S3NVH2 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|BX-12, SRF-TF@2759\|C-2!, SRF-TF@3193\|Az-11 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO:0001708 cell fate... KEGG KO: K12412 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02210	PaHa08g02210`PaHa08g02210.1`	…orphogenesis \| sinoatrial valve morphogenesis \| cardiac ventricle formation \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| humoral immune response \|… Show annotation evidence eggNOG Preferred name: AGL84 \| Seed ortholog: 337451.A0A3S3QM81 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|BX-12, SRF-TF@2759\|C-2!, SRF-TF@3193\|Az-11 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO:0001708 cell fate... KEGG KO: K12412 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02220	PaHa08g02220`PaHa08g02220.1`	…634 \| GO:0005737 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104585631 \| Seed ortholog: 337451.A0A3S3N8M1 \| COG: S \| eggNOG OG: zf-CCCH@131567\|LU-16, zf-CCCH@2759\|AGj-24, zf-CCCH@3193\|Elq-37, zf-CCCH_4@131567\|A-1*, zf-CCCH_4@2759\|Am-7 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription KEGG EC: ec:2.3.2.27, ec:2.7.11.1 \| KO: K08959, K12872, K13107, K13152, K15687, K15690, K27706 \| Pathway: 03040 \| BRITE: 00001, 01000, 01001, 03000, 03012, 03036, 03041, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02290	PaHa08g02290`PaHa08g02290.1`	…orphogenesis \| sinoatrial valve morphogenesis \| cardiac ventricle formation \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| humoral immune response \|… Show annotation evidence eggNOG Preferred name: AGL84 \| Seed ortholog: 337451.A0A443P9F3 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|BX-12, SRF-TF@2759\|C-2!, SRF-TF@3193\|Az-11 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO:0001708 cell fate... KEGG KO: K12412 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02340	PaHa08g02340`PaHa08g02340.1`	…O:0003727 \| GO:0005634 \| GO:0005737 \| GO:0006355 \| GO:0061157 \| DNA binding \| DNA-binding transcription factor activity \| RNA binding \| single-stranded RNA binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| mRNA destabilization Show annotation evidence eggNOG Preferred name: LOC109001542 \| Seed ortholog: 337451.A0A443P9G6 \| COG: S \| eggNOG OG: zf-CCCH_4@131567\|A-1*, zf-CCCH_4@2759\|AB-6 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0003727 single-stranded RNA binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0061157 mRNA destabilization KEGG EC: ec:2.3.2.27 \| KO: K23047 \| Pathway: 03015 \| BRITE: 00001, 01000, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02420	PaHa08g02420`PaHa08g02420.1`	…nscription cis-regulatory region binding \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to nematode \| response to high light intensity \| response t… Show annotation evidence eggNOG Preferred name: LOC103724189 \| Seed ortholog: 337451.A0A3S3QM97 \| COG: S \| eggNOG OG: AP2@131567\|Eb-12, AP2@1437183\|hb-20!, AP2@33090\|Hk-14, C2orf69@2759\|A-1 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009624 response to nematode; GO:0009644... KEGG EC: ec:1.1.1.184, ec:1.1.1.189, ec:1.1.1.197 \| KO: K09286 \| Pathway: 00590, 00790, 00980, 01100 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02430	PaHa08g02430`PaHa08g02430.1`	…nscription cis-regulatory region binding \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to nematode \| response to high light intensity \| response t… Show annotation evidence eggNOG Preferred name: LOC103724189 \| Seed ortholog: 337451.A0A3S3QM97 \| COG: S \| eggNOG OG: AP2@131567\|Eb-12, AP2@1437183\|hb-20!, AP2@33090\|Hk-14, C2orf69@2759\|A-1 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009624 response to nematode; GO:0009644... KEGG EC: ec:1.1.1.184, ec:1.1.1.189, ec:1.1.1.197 \| KO: K09286 \| Pathway: 00590, 00790, 00980, 01100 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02440	PaHa08g02440`PaHa08g02440.1`	…orphogenesis \| sinoatrial valve morphogenesis \| cardiac ventricle formation \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| humoral immune response \|… Show annotation evidence eggNOG Preferred name: AGL84 \| Seed ortholog: 337451.A0A443P9F3 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|BX-12, SRF-TF@2759\|C-2!, SRF-TF@3193\|Az-11 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO:0001708 cell fate... KEGG KO: K12412 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02540	PaHa08g02540`PaHa08g02540.1`	…gion binding \| developmental process involved in reproduction \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| shade avoidance \| response to auxin \| auxin-activated signaling pathway \| response to cytokinin \| unidimensional cell growth \| shoot system morphogene… Show annotation evidence eggNOG Preferred name: LOC104610464 \| Seed ortholog: 337451.A0A3S3NGZ3 \| COG: S \| eggNOG OG: HALZ@131567\|y-8, HALZ@3193\|Bd-11, HALZ@3398\|Ll-16, HALZ@35493\|Au-10, HD-ZIP_N@131567\|A-1*, HD-ZIP_N@3193\|d-9!, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|Tih-40, Homeodomain@3398\|fHj-46, Homeodomain@35493\|BwP-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003006 developmental process involved in reproduction; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009641 shade avoidance; GO:0009733 response to auxin; GO:0009734 auxin-activated signaling pathway; GO:0009735 response to cytokinin; GO:0009826 unidimensional cell growth;... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02670	PaHa08g02670`PaHa08g02670.1`	…700 \| GO:0005634 \| GO:0009834 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis Show annotation evidence eggNOG Preferred name: LOC110794647 \| Seed ortholog: 337451.A0A443P9I9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|GWx-33, AP2@33090\|KR-15, AP2@3398\|AmB-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02860	PaHa08g02860`PaHa08g02860.1`	PaHa08g02860 \| PaHa08g02860.1 \| LOC104602368 \| 337451.A0A443P9P3 \| PG_binding_1@131221\|FHh-28 \| PG_binding_1@131567\|e-5 \| PG_binding_1@1437183\|LvT-37 \| PG_binding_1@2759\|ABO-15 \| PG_binding_1@3193\|GaS-30 \| Peptidase_M10@131567\|AY-8 \| Peptidase_M10@1437183... Show annotation evidence eggNOG Preferred name: LOC104602368 \| Seed ortholog: 337451.A0A443P9P3 \| COG: S \| eggNOG OG: PG_binding_1@131221\|FHh-28, PG_binding_1@131567\|e-5, PG_binding_1@1437183\|LvT-37, PG_binding_1@2759\|ABO-15, PG_binding_1@3193\|GaS-30, Peptidase_M10@131567\|AY-8, Peptidase_M10@1437183\|BaV-35, Peptidase_M10@58023\|AQi-28 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001501 skeletal system development; GO:0001503 ossification; GO:0001525 angiogenesis; GO:0001541 ovarian follicle development; GO:0001542 ovulation from ovarian follicle; GO:0001553 luteinization; GO:0001554 luteolysis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001755 neural crest cell migration; GO:0001822... KEGG EC: ec:3.4.24.12, ec:3.4.24.17, ec:3.4.24.22, ec:3.4.24.23, ec:3.4.24.24, ec:3.4.24.34, ec:3.4.24.35, ec:3.4.24.65, ec:3.4.24.7, ec:3.4.24.80 \| KO: K07999 \| Pathway: 01522, 03320, 04310, 04657, 04668, 04670, 04912, 04915, 04926, 04928, 04933, 05161, 05166, 05171, 05200, 05202, 05205, 05206, 05215, 05219, 05323, 05415, 05417, 05418 \| BRITE: 00001, 01002	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02900	PaHa08g02900`PaHa08g02900.1`	…700 \| GO:0005634 \| GO:0009416 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| response to light stimulus Show annotation evidence eggNOG Preferred name: GATA2 \| Seed ortholog: 337451.A0A3S3MPM5 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@2759\|B-2!, GATA@3193\|Ad-8, GATA@3398\|bb-17, GATA@58023\|Op-15 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009416 response to light stimulus KEGG EC: ec:2.7.11.22, ec:2.8.1.7, ec:5.6.2.7, ec:6.3.2.2 \| KO: K04487, K05626, K05628, K06669, K08817, K09182, K09183, K09184, K11204, K11339, K11648, K11660, K11770, K14809, K14972, K17604, K17894, K17895, K17896, K17897, K18658, K21630, K22040, K22184, K23194, K23407 \| Pathway: 00270, 00480, 00730, 01100, 01240, 03082, 03250, 04022, 04122, 04218, 04530, 04658, 04659, 04919, 04928, 05321 \| Module: M00118 \| BRITE:...	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02920	PaHa08g02920`PaHa08g02920.1`	…GO:0009845 \| GO:0009959 \| GO:0010187 \| GO:0010218 \| GO:0043565 \| GO:0090351 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| response to light stimulus \| plasmodesma \| double fertilization forming a zy… Show annotation evidence eggNOG Preferred name: UNE10 \| Seed ortholog: 337451.A0A443P9N3 \| COG: S \| eggNOG OG: HLH@131221\|BVX-22, HLH@131567\|Zg-14!, HLH@3193\|CEo-24, HLH@33090\|AbI-19, HLH@3398\|KBj-34, HLH@35493\|AqB-20, HLH@58023\|GdY-31 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0009506 plasmodesma; GO:0009567 double fertilization forming a zygote and endosperm; GO:0009637 response to blue light; GO:0009704 de-etiolation; GO:0009753 response to jasmonic... KEGG KO: K12126 \| Pathway: 04075, 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g02980	PaHa08g02980`PaHa08g02980.1`	…634 \| GO:0005737 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: ZAT4 \| Seed ortholog: 337451.A0A443P9L9 \| COG: S \| eggNOG OG: zf-C2H2_6@131567\|B-2, zf-C2H2_6@1437183\|Rt-17, zf-C2H2_6@3398\|DU-12 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g03130	PaHa08g03130`PaHa08g03130.1`	…154 \| GO:0048768 \| GO:0051301 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| circadian rhythm \| cell differentiation \| root hair cell tip growth \| cell division Show annotation evidence eggNOG Preferred name: SCL6 \| Seed ortholog: 337451.A0A443P9Q7 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|CH-12, GRAS@3398\|JO-16, GRAS@58023\|DN-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division KEGG KO: K27747 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g03380	PaHa08g03380`PaHa08g03380.1`	…706 \| GO:1902183 \| GO:2000024 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of flower development \| meristem structural organization \| polarity specification of adaxial/ab… Show annotation evidence eggNOG Preferred name: YAB1 \| Seed ortholog: 337451.A0A3S3NH32 \| COG: S \| eggNOG OG: YABBY@2759\|C-2!, YABBY@3398\|Cc-11 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009909 regulation of flower development; GO:0009933 meristem structural organization; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0010093 specification of floral organ identity; GO... KEGG KO: K25796 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g03580	PaHa08g03580`PaHa08g03580.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: ODO1 \| Seed ortholog: 337451.A0A3S3QP85 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|TFc-50, Myb_DNA-binding@3193\|LZd-44, Myb_DNA-binding@33090\|Eca-37 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g03930	PaHa08g03930`PaHa08g03930.1`	… of meristem growth \| leaf vascular tissue pattern formation \| leaf shaping \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: ZPR4 \| Seed ortholog: 337451.A0A3S3N3E9 \| COG: S \| eggNOG OG: UNK.H0AK@131567\|A-1*, UNK.H0AK@3398\|C-2! GO GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009943 adaxial/abaxial axis specification; GO:0010073 meristem maintenance; GO:0010075 regulation of meristem growth; GO:0010305 leaf vascular tissue pattern formation; GO:0010358 leaf shaping; GO:0140297 DNA-binding transcription factor binding	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g04150	PaHa08g04150`PaHa08g04150.1`	…ne response-activating signaling pathway \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| adenylate cyclase activity \| protein binding \| nucleus \| cytoplasm \| cytosol \| defense response \| response to cold \| response to water deprivation \| response to li… Show annotation evidence eggNOG Preferred name: LOC110789516 \| Seed ortholog: 337451.A0A443PPA8 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|MMM-43, TIR@131567\|fs-17, TIR@1437183\|EDM-37, TIR@2759\|CAj-29, TIR@3193\|CNu-30 GO GO:0000166 nucleotide binding; GO:0002220 innate immune response activating cell surface receptor signaling pathway; GO:0002229 defense response to oomycetes; GO:0002230 positive regulation of defense response to virus by host; GO:0002238 response to molecule of fungal origin; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003674 molecular_function; GO:0003677... KEGG EC: ec:2.7.1.107, ec:3.1.3.16 \| KO: K00901, K03094, K06685, K13453, K13457, K13459, K13460, K13475, K14497, K15559, K15979, K16225, K16226, K19613, K20599 \| Pathway: 00561, 00564, 01100, 01110, 03083, 04016, 04070, 04075, 04120, 04141, 04626 \| BRITE: 00001, 01000, 03021, 03036, 04121, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa08g04180	PaHa08g04180`PaHa08g04180.1`	…is-regulatory region binding \| DNA-binding transcription activator activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| regulation of cell size \| response to nematode \| regulation of defense response \| protein homo… Show annotation evidence eggNOG Preferred name: PCF2 \| Seed ortholog: 337451.A0A3S3N906 \| COG: S \| eggNOG OG: TCP@131221\|AC-7, TCP@131567\|A-1*, TCP@2759\|G-3, TCP@3193\|Fh-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009624 response to nematode; GO:0031347 regulation of defense response; GO:0042803...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

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2,418 genes for “transcription factor”

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