Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

Select useful genes and continue directly to GO enrichment or batch sequence export.

Search identifiers instead
0 genes selectedThe selection is stored only in this browser.
GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
PaHa07g29620PaHa07g29620.1

…0006289 | GO:0006357 | GO:0008270 | GO:0016251 | GO:0061630 | protein binding | nucleus | transcription factor TFIIH holo complex | nucleotide-excision repair | regulation of transcription by RNA polymerase II | zinc ion binding | RNA polymerase II general transcription initiation factor activity | …

Show annotation evidence
eggNOG
Preferred name: GTF2H2 | Seed ortholog: 337451.A0A3S4P5H3 | COG: S | eggNOG OG: C1_4@2759|A-1, Ssl1@2759|A-1
GO
GO:0005515 protein binding; GO:0005634 nucleus; GO:0005675 transcription factor TFIIH holo complex; GO:0006289 nucleotide-excision repair; GO:0006357 regulation of transcription by RNA polymerase II; GO:0008270 zinc ion binding; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0061630 ubiquitin protein ligase activity
KEGG
EC: ec:2.3.1.225, ec:3.1.3.16 | KO: K03142 | Pathway: 03022, 03420 | BRITE: 00001, 03021, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa07g29900PaHa07g29900.1

…802 | GO:0048364 | GO:0048507 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | embryo development ending in seed dormancy | flower development | longitudinal axis sp…

Show annotation evidence
eggNOG
Preferred name: ARF5 | Seed ortholog: 337451.A0A3S3QJ73 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xV-20, AUX_IAA@3398|AEt-21, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|AZ-8, Auxin_resp@3398|Bi-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqT-23, B3@33090|Id-12, B3@3398|BZe-26
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy; GO:0009908 flower development; GO:0009942 longitudinal axis specification; GO:0010051 xylem and phloem pattern formation...
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa07g29990PaHa07g29990.1

…l morphogenesis | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | glucosinolate metabolic process | DNA endoreduplication | signal transduction in response to DNA damage | positive regulation of programme…

Show annotation evidence
eggNOG
Preferred name: E2FB | Seed ortholog: 337451.A0A443P591 | COG: S | eggNOG OG: E2F_CC-MB@131567|A-1*, E2F_CC-MB@2759|B-2, E2F_CC-MB@3398|IR-15, E2F_TDP@131567|Af-9, E2F_TDP@3193|bk-27
GO
GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0019760 glucosinolate metabolic process; GO:0042023 DNA endoreduplication; GO:0042770 signal transduction in response to DNA damage; GO:0043068 positive regulation of programmed...
KEGG
KO: K06620 | Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g30530PaHa07g30530.1

…565 | GO:0045892 | GO:1901141 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to wounding | sequence-specific DNA binding | negative regulation of DNA-templated transcription | regulation of lignin biosynthetic process

Show annotation evidence
eggNOG
Preferred name: MYB1 | Seed ortholog: 337451.A0A443NT65 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UUG-51, Myb_DNA-binding@35493|KPq-43
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:1901141 regulation of lignin biosynthetic process
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g30570PaHa07g30570.1

PaHa07g30570 | PaHa07g30570.1 | PGP13 | 337451.A0A3S4P5P0 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3193|kVI-50 | ABC_membrane@35493|WZp-46 | ABC_tran|ANHGKU@131567 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 | 01000 | 02000 |...

Show annotation evidence
eggNOG
Preferred name: PGP13 | Seed ortholog: 337451.A0A3S4P5P0 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3193|kVI-50, ABC_membrane@35493|WZp-46, ABC_tran|ANHGKU@131567
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006473 protein acetylation; GO:0006508 proteolysis; GO:0006629 lipid metabolic process; GO:0006631 fatty acid metabolic process; GO:0006699 bile acid biosynthetic process; GO:0006703 estrogen...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
PaHa07g30630PaHa07g30630.1

…34 | GO:0010043 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to zinc ion

Show annotation evidence
eggNOG
Preferred name: BZIP19 | Seed ortholog: 337451.A0A3S3NT28 | COG: S | eggNOG OG: bZIP_2@131567|Fg-13, bZIP_2@2759|LL-15, bZIP_2@3193|ADB-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010043 response to zinc ion
KEGG
KO: K25785 | Pathway: 04013, 04624 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g30830PaHa07g30830.1

…GO:0006355 | GO:0009648 | GO:0009909 | GO:0009911 | GO:0045893 | GO:2000028 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | photoperiodism | regulation of flower development | positive regulation of flower development | positive r…

Show annotation evidence
eggNOG
Preferred name: LOC109018988 | Seed ortholog: 3635.A0A1U8JBJ3 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@33090|aZ-18, bZIP_1@3633|IdH-42
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009648 photoperiodism; GO:0009909 regulation of flower development; GO:0009911 positive regulation of flower development; GO:0045893 positive regulation of DNA-templated transcription; GO:2000028 regulation of photoperiodism, flowering
KEGG
KO: K14432 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31010PaHa07g31010.1

…789 | GO:0034976 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | endoplasmic reticulum membrane | response to endoplasmic reticulum stress | sequence-specific DNA binding

Show annotation evidence
eggNOG
Preferred name: TGA1B | Seed ortholog: 337451.A0A3S3NHI4 | eggNOG OG: bZIP_1@131567|BN-8
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005789 endoplasmic reticulum membrane; GO:0034976 response to endoplasmic reticulum stress; GO:0043565 sequence-specific DNA binding
KEGG
KO: K25783 | Pathway: 04011, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31390PaHa07g31390.1

…vity | minor groove of adenine-thymine-rich DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription elongation factor activity | transcription coactivator activity | transcription corepressor activity | RNA binding | helicase activity | histone acetyltransferase a…

Show annotation evidence
eggNOG
Preferred name: LOC110788572 | Seed ortholog: 337451.A0A3S3MLW6 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@1437183|Kh-12, PHD@2759|B-2!, TDBD@131567|A-1*, TDBD@2759|Ai-9, TDBD@33090|BL-10, TDBD@3398|KJ-16
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000278 mitotic cell cycle; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000724 double-strand break repair via homologous recombination; GO:0000727 double-strand break repair via...
KEGG
EC: ec:1.14.11.27, ec:1.14.11.65, ec:1.14.11.67, ec:2.1.1.354, ec:2.1.1.357, ec:2.1.1.369, ec:2.1.1.370, ec:2.1.1.371, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.11.22, ec:2.7.11.23, ec:2.7.4.14, ec:2.8.3.13, ec:3.1.3.16, ec:5.6.2.6, ec:6.1.1.6 | KO: K02603, K02606, K04498, K04567, K06062, K06101, K06672, K07117, K08819, K08881, K08882, K08883, K09186, K09187, K09188, K09189, K10276, K10603, K10638, K10728, K10875, K10896,...
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31610PaHa07g31610.1

…34 | GO:2000278 | negative regulation of transcription by RNA polymerase II | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of transcription by RNA polymerase II | transcription by RNA polymerase II | DNA damage respons…

Show annotation evidence
eggNOG
Preferred name: LOC100837384 | Seed ortholog: 337451.A0A3S3MLY1 | COG: S | eggNOG OG: DP@2759|A-1, DP@33090|HU-19, E2F_TDP@131567|Ag-9, E2F_TDP@35493|Rr-23
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006366 transcription by RNA polymerase II; GO:0006974 DNA damage response; GO:0007113 endomitotic cell cycle; GO:0007307...
KEGG
KO: K04683 | Pathway: 03083 | BRITE: 00001, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31640PaHa07g31640.1

…transcription cis-regulatory region binding | regionalization | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | response to wounding | response to insect | photomorphogenesis | response to jasmonic acid | regulation of glucosinolate bio…

Show annotation evidence
eggNOG
Preferred name: DOF3.6 | Seed ortholog: 337451.A0A443P5L1 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@1437183|AEN-21, zf-Dof@3193|Bv-8, zf-Dof@33090|d-5, zf-Dof@3398|GM-11, zf-Dof@58023|Ea-10
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003002 regionalization; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009611 response to wounding; GO:0009625 response to insect; GO:0009640 photomorphogenesis; GO:0009753 response to jasmonic acid; GO:0010439 regulation of glucosinolate...
eggNOGGO
eggNOG-inferred
PaHa07g31740PaHa07g31740.1

…cell cycle | cardiac muscle tissue morphogenesis | RNA polymerase II-specific DNA-binding transcription factor binding | fungal biofilm matrix | R-SMAD binding | cellular response to lipopolysaccharide | cellular response to mechanical stimulus | cellular response to interleukin-1 | cellular respons…

Show annotation evidence
eggNOG
Preferred name: LOC104607872 | Seed ortholog: 337451.A0A3S3P9H7 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|PnG-26!, Ank_2@2759|hb-12, Ank_2@3398|BRd-16, Ank_4@131567|Og-18, PGG@131567|A-1*, PGG@1437183|EY-10!, PGG@33090|Z-5
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000791 euchromatin; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001650 fibrillar center; GO:0001817 regulation of cytokine production; GO:0002039 p53 binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO...
KEGG
KO: K21435 | Pathway: 04011, 04111, 04113, 04820 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31870PaHa07g31870.1

…176 | GO:1901002 | GO:1902584 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | DNA damage response | negative regulation of cell population proliferation | response to cold | response to ethylene | response to auxin | response to…

Show annotation evidence
eggNOG
Preferred name: MYB3R3 | Seed ortholog: 337451.A0A443P5Q2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008285 negative regulation of cell population proliferation; GO:0009409 response to cold; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic...
KEGG
KO: K09422 | Pathway: 04151, 04218 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g31900PaHa07g31900.1

…nsed chromosome | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | asymmetric cell division | response to virus | polarity specification of adaxial/abaxial axis | proximal/distal axis specification | leaf …

Show annotation evidence
eggNOG
Preferred name: AS1 | Seed ortholog: 4432.A0A1U8APA9 | COG: S | eggNOG OG: Myb_DNA-binding@131221|BKe-31, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|CbR-34
GO
GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0008356 asymmetric cell division; GO:0009615 response to virus; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009946 proximal/distal axis specification; GO...
KEGG
EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32040PaHa07g32040.1

…515 | GO:0005634 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SCL9 | Seed ortholog: 337451.A0A3S3N654 | COG: S | eggNOG OG: GRAS@131567|Ae-10, GRAS@3398|AAu-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K27753 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32090PaHa07g32090.1

…700 | GO:0005515 | GO:0005634 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY49 | Seed ortholog: 337451.A0A3S3P9J8 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|MS-15, WRKY@3193|QV-16, WRKY@3398|fu-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
PaHa07g32220PaHa07g32220.1

…515 | GO:0005516 | GO:0005634 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY15 | Seed ortholog: 337451.A0A3S3Q1M9 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|Aw-8, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|N-4, WRKY@131567|A-1*, WRKY@1437183|Agk-26!, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zR-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32240PaHa07g32240.1

PaHa07g32240 | PaHa07g32240.1 | FES1B | 337451.A0A3S3NTB6 | Fes1@131567|A-1* | Fes1@2759|P-5 | Fes1@3398|Ny-18 | NABP@131567|A-1* | NABP@2759|C-2 | NABP@3398|M-4 | PUF@131567|Dq-15 | PUF@2759|FE-16 | PUF@3398|Apn-35 | PUF@35493|nu-27 | S | ec:3.6.5.5 |...

Show annotation evidence
eggNOG
Preferred name: FES1B | Seed ortholog: 337451.A0A3S3NTB6 | COG: S | eggNOG OG: Fes1@131567|A-1*, Fes1@2759|P-5, Fes1@3398|Ny-18, NABP@131567|A-1*, NABP@2759|C-2, NABP@3398|M-4, PUF@131567|Dq-15, PUF@2759|FE-16, PUF@3398|Apn-35, PUF@35493|nu-27
GO
GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0001501 skeletal system development; GO:0001942 hair follicle development; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005737 cytoplasm; GO...
KEGG
EC: ec:3.6.5.5 | KO: K09562 | Pathway: 04141 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32250PaHa07g32250.1

PaHa07g32250 | PaHa07g32250.1 | FES1B | 337451.A0A3S3NTB6 | Fes1@131567|A-1* | Fes1@2759|P-5 | Fes1@3398|Ny-18 | NABP@131567|A-1* | NABP@2759|C-2 | NABP@3398|M-4 | PUF@131567|Dq-15 | PUF@2759|FE-16 | PUF@3398|Apn-35 | PUF@35493|nu-27 | S | ec:3.6.5.5 |...

Show annotation evidence
eggNOG
Preferred name: FES1B | Seed ortholog: 337451.A0A3S3NTB6 | COG: S | eggNOG OG: Fes1@131567|A-1*, Fes1@2759|P-5, Fes1@3398|Ny-18, NABP@131567|A-1*, NABP@2759|C-2, NABP@3398|M-4, PUF@131567|Dq-15, PUF@2759|FE-16, PUF@3398|Apn-35, PUF@35493|nu-27
GO
GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0001501 skeletal system development; GO:0001942 hair follicle development; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005737 cytoplasm; GO...
KEGG
EC: ec:3.6.5.5 | KO: K09562 | Pathway: 04141 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32260PaHa07g32260.1

PaHa07g32260 | PaHa07g32260.1 | FES1B | 337451.A0A3S3NTB6 | Fes1@131567|A-1* | Fes1@2759|P-5 | Fes1@3398|Ny-18 | NABP@131567|A-1* | NABP@2759|C-2 | NABP@3398|M-4 | PUF@131567|Dq-15 | PUF@2759|FE-16 | PUF@3398|Apn-35 | PUF@35493|nu-27 | S | ec:3.6.5.5 |...

Show annotation evidence
eggNOG
Preferred name: FES1B | Seed ortholog: 337451.A0A3S3NTB6 | COG: S | eggNOG OG: Fes1@131567|A-1*, Fes1@2759|P-5, Fes1@3398|Ny-18, NABP@131567|A-1*, NABP@2759|C-2, NABP@3398|M-4, PUF@131567|Dq-15, PUF@2759|FE-16, PUF@3398|Apn-35, PUF@35493|nu-27
GO
GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0001501 skeletal system development; GO:0001942 hair follicle development; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005737 cytoplasm; GO...
KEGG
EC: ec:3.6.5.5 | KO: K09562 | Pathway: 04141 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32270PaHa07g32270.1

…52 | GO:0042753 | negative regulation of transcription by RNA polymerase II | DNA-binding transcription factor activity | nucleus | transcription regulator complex | regulation of DNA-templated transcription | circadian rhythm | regulation of flower development | regulation of gene expression | regu…

Show annotation evidence
eggNOG
Preferred name: ARR2 | Seed ortholog: 337451.A0A443P5Y2 | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|AYx-28
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009909 regulation of flower development; GO:0010468 regulation of gene expression; GO:0042752 regulation of circadian rhythm; GO:0042753...
KEGG
KO: K09422, K11111, K12860, K14491, K16166, K17613, K25749 | Pathway: 03040, 04075, 04712 | BRITE: 00001, 01009, 03000, 03032, 03041, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32410PaHa07g32410.1

…_6@3398|BAm-25 | S | zf-C2H2_6_56_80 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: RBE | Seed ortholog: 337451.A0A443P5S4 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|DNj-30, zf-C2H2_6@3193|vX-21, zf-C2H2_6@3398|BAm-25
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
PaHa07g32730PaHa07g32730.1

…GO:0043565 | GO:0045892 | GO:0048367 | GO:0048457 | GO:0080006 | GO:1905393 | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | pattern specification process | xylem and phloem pattern formation | maintenance of floral meristem identity | maintenance of inflorescence …

Show annotation evidence
eggNOG
Preferred name: BLH9 | Seed ortholog: 337451.A0A3S3MM59 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@1437183|Xi-18, Homeobox_KN@2759|C-2!, Homeobox_KN@3398|Lz-15, Homeobox_KN@58023|Dh-11, POX@131567|A-1*, POX@1437183|AO-11, POX@3193|R-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0007389 pattern specification process; GO:0010051 xylem and phloem pattern formation; GO:0010076 maintenance of floral meristem identity; GO:0010077 maintenance of inflorescence meristem identity; GO:0010089 xylem development; GO:0010154 fruit development; GO:0010223 secondary shoot...
KEGG
EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa07g32970PaHa07g32970.1

…55 | GO:0016607 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | cytosol | regulation of DNA-templated transcription | pollen development | nuclear speck

Show annotation evidence
eggNOG
Preferred name: MYB1 | Seed ortholog: 337451.A0A443P5Y4 | eggNOG OG: Myb_DNA-binding@131567|AhB-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0016607 nuclear speck
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa08g00060PaHa08g00060.1

…polymerase II | histone H3K27me3 reader activity | RNA polymerase II-specific DNA-binding transcription factor binding | ubiquitin conjugating enzyme activity | protein-lysine-acetyltransferase activity | cellular response to ATP | histone H4K16ac reader activity | transcription regulator inhibitor …

Show annotation evidence
eggNOG
Preferred name: LOC110796350 | Seed ortholog: 337451.A0A3S3NGN5 | COG: S | eggNOG OG: Cir_N@131567|p-7, zf-CCHC_6@2759|A-1
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000209 protein polyubiquitination; GO:0000976 transcription cis-regulatory region binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0001091 RNA polymerase II general transcription initiation factor binding; GO:0001181 RNA polymerase I general transcription initiation factor activity; GO:0002039 p53 binding...
KEGG
EC: ec:2.3.1.48, ec:2.7.11.1 | KO: K06066 | Pathway: 03022, 03040 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa08g00220PaHa08g00220.1

…14_221_609 | GO:0003700 | GO:0005515 | GO:0005576 | GO:0005634 | GO:0048831 | DNA-binding transcription factor activity | protein binding | extracellular region | nucleus | regulation of shoot system development

Show annotation evidence
eggNOG
Preferred name: LOC104610318 | Seed ortholog: 337451.A0A443P8Y7 | COG: S | eggNOG OG: BES1_N@131567|A-1*, BES1_N@3398|U-6, BES1_N@35493|H-4, Glyco_hydro_14@131567|AV-8, Glyco_hydro_14@33090|Ce-12
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0048831 regulation of shoot system development
KEGG
EC: ec:3.2.1.2 | KO: K01177 | Pathway: 00500, 01100, 01110 | BRITE: 00001, 01000 | CAZy: GH14|Glycoside Hydrolase Family 14.
eggNOGGOKEGG
eggNOG-inferred
PaHa08g00230PaHa08g00230.1

PaHa08g00230 | PaHa08g00230.1 | LOC103720730 | 337451.A0A3S3MP90 | Sigma70_r2@131567|AQM-18! | Sigma70_r2@33090|NGm-29 | Sigma70_r2@58023|PZm-30 | Sigma70_r3@131567|C-2! | Sigma70_r4@131567|Bnn-30 | COG0568 | K03086 | 00001 | 03021 | Sigma70_r2_269_336 |...

Show annotation evidence
eggNOG
Preferred name: LOC103720730 | Seed ortholog: 337451.A0A3S3MP90 | COG: COG0568 | eggNOG OG: Sigma70_r2@131567|AQM-18!, Sigma70_r2@33090|NGm-29, Sigma70_r2@58023|PZm-30, Sigma70_r3@131567|C-2!, Sigma70_r4@131567|Bnn-30
GO
GO:0005515 protein binding; GO:0006352 DNA-templated transcription initiation; GO:0006355 regulation of DNA-templated transcription; GO:0009507 chloroplast; GO:0016987 sigma factor activity; GO:0071461 cellular response to redox state; GO:0071482 cellular response to light stimulus; GO:0080005 photosystem stoichiometry adjustment; GO:2001141 regulation of RNA biosynthetic process
KEGG
KO: K03086 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa08g00550PaHa08g00550.1

…GO:0006355 | GO:0009555 | GO:0043068 | GO:0048658 | GO:0052543 | GO:0070888 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | positive regulation of programmed cell death | anther wall tapetum development | call…

Show annotation evidence
eggNOG
Preferred name: BHLH10 | Seed ortholog: 337451.A0A3S3MPA2 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|CWr-25, HLH@33090|AAF-17, HLH@3398|DyB-28, HLH@35493|Aps-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0043068 positive regulation of programmed cell death; GO:0048658 anther wall tapetum development; GO:0052543 callose deposition in cell wall; GO:0070888 E-box binding
eggNOGGO
eggNOG-inferred
PaHa08g00640PaHa08g00640.1

…rdium development | optic vesicle morphogenesis | neural retina development | DNA-binding transcription factor activity | nucleus | DNA-templated transcription | regulation of DNA-templated transcription | regulation of transcription by RNA polymerase II | protein import into nucleus | telomere main…

Show annotation evidence
eggNOG
Preferred name: HAT14 | Seed ortholog: 337451.A0A443P937 | COG: S | eggNOG OG: HALZ@131567|y-8, HALZ@3193|Be-11, HALZ@35493|Au-10, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|QMa-38, Homeodomain@3398|ZJA-43, Homeodomain@35493|BwP-25
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0001654 eye development; GO:0001655 urogenital system development; GO:0001656 metanephros development; GO:0001657 ureteric bud development; GO:0001658 branching involved in ureteric bud morphogenesis; GO:0001744 insect visual primordium formation; GO:0001745 compound eye morphogenesis;...
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa08g00860PaHa08g00860.1

…802 | GO:0043565 | GO:0045893 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | identical protein binding | sequence-specific DNA binding | positive regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BZIP68 | Seed ortholog: 337451.A0A443P981 | COG: S | eggNOG OG: MFMR@131221|G-3, MFMR@131567|A-1*, MFMR@3398|Y-5, MFMR_assoc@131567|A-1*, MFMR_assoc@3398|M-4, bZIP_1@131567|Ac-7, bZIP_1@3398|wD-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
KEGG
KO: K09060 | Pathway: 04011 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

Pages