Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa06g26220	PaHa06g26220`PaHa06g26220.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC107766160 \| Seed ortholog: 337451.A0A443PBC4 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AAZ-26, LRR_8@3398\|qr-25, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g26280	PaHa06g26280`PaHa06g26280.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC103713018 \| Seed ortholog: 337451.A0A443PB62 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g26290	PaHa06g26290`PaHa06g26290.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC107766160 \| Seed ortholog: 337451.A0A443PBC4 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AAZ-26, LRR_8@3398\|qr-25, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g26380	PaHa06g26380`PaHa06g26380.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC103713018 \| Seed ortholog: 337451.A0A443PB62 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g26390	PaHa06g26390`PaHa06g26390.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC107766160 \| Seed ortholog: 337451.A0A443PBC4 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|C-2!, LRR_8@1437183\|AAZ-26, LRR_8@3398\|qr-25, NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g26420	PaHa06g26420`PaHa06g26420.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| mitochondrion \| defense response \| response to cold \| response to water deprivation \| response to light stimulus \| response to virus \| plant-type… Show annotation evidence eggNOG Preferred name: LOC103713018 \| Seed ortholog: 337451.A0A443PB62 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|PLX-46, NB-ARC@35493\|AQS-21 GO GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g00340	PaHa07g00340`PaHa07g00340.1`	… binding \| DNA-templated transcriptional start site selection \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to water deprivation \| response to blue light \| response to gibberellin \| glucosinolate metabolic process \| protein homodimerization activity… Show annotation evidence eggNOG Preferred name: ZHD11 \| Seed ortholog: 337451.A0A443NZQ7 \| COG: S \| eggNOG OG: ZF-HD_dimer@131567\|A-1*, ZF-HD_dimer@35493\|Aq-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0001173 DNA-templated transcriptional start site selection; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009637 response to blue light; GO:0009739 response to gibberellin; GO:0019760 glucosinolate metabolic process; GO:0042803...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g00350	PaHa07g00350`PaHa07g00350.1`	…893 \| GO:1904278 \| GO:2000033 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to cold \| response to water deprivation \| regulation of abscisic acid-activated signaling pathway… Show annotation evidence eggNOG Preferred name: MYB306 \| Seed ortholog: 337451.A0A3S3MPY9 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|ZMr-55, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|USz-51, Myb_DNA-binding@35493\|KPp-43 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009789 positive regulation of abscisic acid-activated... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g00380	PaHa07g00380`PaHa07g00380.1`	…GO:0003700 \| GO:0005634 \| GO:0009733 \| GO:0045770 \| GO:0048103 \| GO:0048829 \| DNA-binding transcription factor activity \| nucleus \| response to auxin \| positive regulation of asymmetric cell division \| somatic stem cell division \| root cap development Show annotation evidence eggNOG Preferred name: FEZ \| Seed ortholog: 337451.A0A3S3NPM5 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|hd-15, NAM@3398\|CDh-26, NAM@35493\|AE-6, NAM@58023\|BJP-23 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0045770 positive regulation of asymmetric cell division; GO:0048103 somatic stem cell division; GO:0048829 root cap development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g00900	PaHa07g00900`PaHa07g00900.1`	…GO:0042742 \| GO:0043565 \| GO:0050832 \| GO:0070417 \| GO:0106167 \| GO:1900367 \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| response to cold \| leaf senescence \| defense response to bacterium \| sequ… Show annotation evidence eggNOG Preferred name: LOC104605988 \| Seed ortholog: 337451.A0A3S3NAU9 \| COG: S \| eggNOG OG: Ank_2@131567\|Mm-10, Ank_2@1437183\|kAg-32, Ank_2@2759\|BXW-16, Ank_2@3193\|Xgc-28, IQ@131567\|aD-16, IQ@3398\|COo-26, IQ@35493\|Alf-22, TIG@131567\|Og-15, TIG@33090\|Bjr-29, TIG@3398\|BzM-31 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0010150 leaf senescence; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding; GO:0050832 defense response to fungus; GO:0070417 cellular response... KEGG KO: K21596 \| Pathway: 01523, 03266, 03440, 04010, 04014, 04024, 04062, 04064, 04066, 04071, 04075, 04144, 04151, 04210, 04211, 04218, 04380, 04613, 04620, 04621, 04622, 04623, 04624, 04625, 04657, 04658, 04659, 04660, 04662, 04668, 04722, 04820, 04917, 04920, 04926, 04931, 04932, 04933, 04936, 05010, 05022, 05030, 05132, 05133, 05134, 05135, 05140, 05142, 05145, 05146, 05152, 05160, 05161, 05162, 05163, 05164,...	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g00960	PaHa07g00960`PaHa07g00960.1`	… 04075 \| 00001 \| 03000 \| EIN3_32_267 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: EIL4 \| Seed ortholog: 337451.A0A443NZY4 \| COG: S \| eggNOG OG: EIN3@131567\|A-1*, EIN3@35493\|Z-5 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K14514 \| Pathway: 04016, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01010	PaHa07g01010`PaHa07g01010.1`	…latory region binding \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| biological_process \| suberin biosynthetic process \| positive regulation of fatty acid biosynthetic process \| cellular response to auxin st… Show annotation evidence eggNOG Preferred name: MYB39 \| Seed ortholog: 337451.A0A443P009 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|HJd-40, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@35493\|GNw-39, Myb_DNA-binding@58023\|Miz-45 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01080	PaHa07g01080`PaHa07g01080.1`	…latory region binding \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| biological_process \| suberin biosynthetic process \| positive regulation of fatty acid biosynthetic process \| cellular response to auxin st… Show annotation evidence eggNOG Preferred name: MYB39 \| Seed ortholog: 337451.A0A443NZW9 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|HJd-40, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@35493\|GNw-39, Myb_DNA-binding@58023\|Miz-45 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0010345 suberin biosynthetic process; GO:0045723 positive regulation of fatty acid biosynthetic process; GO:0071365 cellular response to... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01130	PaHa07g01130`PaHa07g01130.1`	PaHa07g01130 \| PaHa07g01130.1 \| ABCG11 \| 337451.A0A3S3MHW2 \| ABC2_membrane@131567\|O-4 \| ABC2_membrane@2759\|Bwa-22 \| ABC2_membrane@3193\|HYI-29 \| ABC2_membrane_7@131567\|C-2 \| ABC2_membrane_7@2759\|Lp-14 \| ABC2_membrane_7@3193\|kS-20 \| ABC_tran\|UQ33RK@131567 \|... Show annotation evidence eggNOG Preferred name: ABCG11 \| Seed ortholog: 337451.A0A3S3MHW2 \| COG: S \| eggNOG OG: ABC2_membrane@131567\|O-4, ABC2_membrane@2759\|Bwa-22, ABC2_membrane@3193\|HYI-29, ABC2_membrane_7@131567\|C-2, ABC2_membrane_7@2759\|Lp-14, ABC2_membrane_7@3193\|kS-20, ABC_tran\|UQ33RK@131567, ABC_tran\|UQ33RK@2759, ABC_tran\|UQ33RK@3398 GO GO:0000139 Golgi membrane; GO:0002040 sprouting angiogenesis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005543 phospholipid binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006641 triglyceride... KEGG KO: K05681 \| Pathway: 02010 \| BRITE: 00001, 02000, 04090, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01160	PaHa07g01160`PaHa07g01160.1`	PaHa07g01160 \| PaHa07g01160.1 \| ABCG11 \| 337451.A0A3S3MHW2 \| ABC2_membrane@131567\|O-4 \| ABC2_membrane@2759\|Bwa-22 \| ABC2_membrane@3193\|HYI-29 \| ABC2_membrane_7@131567\|C-2 \| ABC2_membrane_7@2759\|Lp-14 \| ABC2_membrane_7@3193\|kS-20 \| ABC_tran\|UQ33RK@131567 \|... Show annotation evidence eggNOG Preferred name: ABCG11 \| Seed ortholog: 337451.A0A3S3MHW2 \| COG: S \| eggNOG OG: ABC2_membrane@131567\|O-4, ABC2_membrane@2759\|Bwa-22, ABC2_membrane@3193\|HYI-29, ABC2_membrane_7@131567\|C-2, ABC2_membrane_7@2759\|Lp-14, ABC2_membrane_7@3193\|kS-20, ABC_tran\|UQ33RK@131567, ABC_tran\|UQ33RK@2759, ABC_tran\|UQ33RK@3398 GO GO:0000139 Golgi membrane; GO:0002040 sprouting angiogenesis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005543 phospholipid binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006641 triglyceride... KEGG KO: K05681 \| Pathway: 02010 \| BRITE: 00001, 02000, 04090, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01310	PaHa07g01310`PaHa07g01310.1`	…1 \| 03000 \| HLH_132_183 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104608628 \| Seed ortholog: 337451.A0A443P026 \| COG: S \| eggNOG OG: HLH@131567\|OW-12, HLH@3193\|AAN-17, HLH@3398\|Aqo-20, HLH@35493\|gX-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K09092, K22495 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01490	PaHa07g01490`PaHa07g01490.1`	…GO:0045892 \| mRNA regulatory element binding translation repressor activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to temperature stimulus \| negative regulation of flower development \| sequence-specific DNA binding \| negative regulation of DNA-templated tr… Show annotation evidence eggNOG Preferred name: SVP \| Seed ortholog: 4432.A0A1U8B8Q9 \| COG: S \| eggNOG OG: K-box@131567\|A-1, K-box@2759\|F-3, K-box@3398\|ZT-16, K-box@35493\|M-4, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2!, SRF-TF@3398\|BZM-27 GO GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009266 response to temperature stimulus; GO:0009910 negative regulation of flower development; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g01660	PaHa07g01660`PaHa07g01660.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104592198 \| Seed ortholog: 337451.A0A3S3N7X7 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|Dli-32, NB-ARC@35493\|Ary-24, NB-ARC@58023\|BfR-27 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13457 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02180	PaHa07g02180`PaHa07g02180.1`	…893 \| GO:0071497 \| GO:1900030 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| response to salicylic acid \| response to jasmonic acid \| jasmonic acid and ethylene-dependent systemic resistance \| salicylic acid mediated signaling pathway \| cellular… Show annotation evidence eggNOG Preferred name: ERF012 \| Seed ortholog: 337451.A0A3S4P0L8 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|eA-19, AP2@3193\|Nu-16, AP2@33090\|Hw-14 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0009861 jasmonic acid and ethylene-dependent systemic resistance; GO:0009863 salicylic acid mediated signaling pathway; GO:0034605 cellular response to heat; GO:0045088 regulation of innate immune response;... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02320	PaHa07g02320`PaHa07g02320.1`	…RNA polymerase II \| chromatin \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| cellular_component \| nucleus \| nucleolus \| cytoplasm \| cytosol \| chromatin remodeling \| regulation of DNA-templated transcription \| circadian rhythm \| response … Show annotation evidence eggNOG Preferred name: GATA9 \| Seed ortholog: 337451.A0A3S3NDP0 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@2759\|Cp-10 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated... KEGG KO: K09184, K11648, K11770, K14972, K23407 \| Pathway: 03082, 03250 \| BRITE: 00001, 01009, 03000, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02470	PaHa07g02470`PaHa07g02470.1`	…GO:0005634 \| GO:0006355 \| GO:0010197 \| GO:0010500 \| GO:0048462 \| GO:0048467 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| polar nucleus fusion \| transmitting tissue development \| carpel formation \| gynoecium development Show annotation evidence eggNOG Preferred name: BHLH87 \| Seed ortholog: 337451.A0A3S3NB53 \| COG: S \| eggNOG OG: HLH@3398\|Bwr-24, HLH@58023\|x-7 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010197 polar nucleus fusion; GO:0010500 transmitting tissue development; GO:0048462 carpel formation; GO:0048467 gynoecium development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02610	PaHa07g02610`PaHa07g02610.1`	PaHa07g02610 \| PaHa07g02610.1 \| LOC104592497 \| 337451.A0A3S3N2F0 \| SNAPC1@2759\|A-1 \| S \| K15208 \| 00001 \| 03021 \| SNAPC1_6_201 \| GO:0000978 \| GO:0000995 \| GO:0001006 \| GO:0001046 \| GO:0003677 \| GO:0003681 \| GO:0005515 \| GO:0005634 \| GO:0005654 \| GO:0005730 ... Show annotation evidence eggNOG Preferred name: LOC104592497 \| Seed ortholog: 337451.A0A3S3N2F0 \| COG: S \| eggNOG OG: SNAPC1@2759\|A-1 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003681 bent DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654... KEGG KO: K15208 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02800	PaHa07g02800`PaHa07g02800.1`	…976 \| GO:0003700 \| GO:0005634 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus Show annotation evidence eggNOG Preferred name: DREB5E \| Seed ortholog: 337451.A0A3S3N2G1 \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KS-15 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g02830	PaHa07g02830`PaHa07g02830.1`	…510 \| GO:0048653 \| GO:0090356 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| somatic embryogenesis \| leaf shaping \| sequence-specific DNA binding \| positive regulation of DNA-templated transcription \| … Show annotation evidence eggNOG Preferred name: SPL12 \| Seed ortholog: 337451.A0A3S3MI50 \| COG: S \| eggNOG OG: SBP@131567\|A-1*, SBP@3193\|AG-7, SBP@33090\|I-4 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010262 somatic embryogenesis; GO:0010358 leaf shaping; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048510 regulation of timing of transition from vegetative to...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g03510	PaHa07g03510`PaHa07g03510.1`	…Myb_DNA-binding_133_181 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009409 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to cold Show annotation evidence eggNOG Preferred name: LOC110802850 \| Seed ortholog: 337451.A0A443N8A2 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@33090\|AYy-28 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold KEGG KO: K09422, K11111, K12860, K14491, K16166, K17613, K25749 \| Pathway: 03040, 04075, 04712 \| BRITE: 00001, 01009, 03000, 03032, 03041, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g04270	PaHa07g04270`PaHa07g04270.1`	…GO:0043565 \| GO:0045892 \| GO:0060860 \| GO:0060862 \| GO:0080050 \| GO:1901347 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| sequence-specific DNA binding \| negative regulation of DNA-templated transcription \| regulation of floral … Show annotation evidence eggNOG Preferred name: LOC103718394 \| Seed ortholog: 337451.A0A443P0W6 \| COG: S \| eggNOG OG: UNK.EP8F@131567\|A-1*, UNK.EP8F@1437183\|j-7, UNK.EP8F@3193\|B-2, UNK.EP8F@3398\|b-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0060860 regulation of floral organ abscission; GO:0060862 negative regulation of floral organ abscission; GO:0080050 regulation of seed development; GO...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g04350	PaHa07g04350`PaHa07g04350.1`	PaHa07g04350 \| PaHa07g04350.1 \| LOC104612638 \| 337451.A0A3S3NBI5 \| Sigma70_r2@131567\|AQM-18! \| Sigma70_r2@33090\|NGm-29 \| Sigma70_r2@58023\|SCe-31 \| Sigma70_r3@131567\|C-2! \| Sigma70_r3@58023\|El-10 \| Sigma70_r4@131567\|Bnn-30 \| COG0568 \| ec:6.1.1.7 \| K01872 \|... Show annotation evidence eggNOG Preferred name: LOC104612638 \| Seed ortholog: 337451.A0A3S3NBI5 \| COG: COG0568 \| eggNOG OG: Sigma70_r2@131567\|AQM-18!, Sigma70_r2@33090\|NGm-29, Sigma70_r2@58023\|SCe-31, Sigma70_r3@131567\|C-2!, Sigma70_r3@58023\|El-10, Sigma70_r4@131567\|Bnn-30 GO GO:0006352 DNA-templated transcription initiation; GO:0006399 tRNA metabolic process; GO:0009507 chloroplast; GO:0009658 chloroplast organization; GO:0010114 response to red light; GO:0016987 sigma factor activity; GO:0071482 cellular response to light stimulus; GO:2001141 regulation of RNA biosynthetic process KEGG EC: ec:6.1.1.7 \| KO: K01872 \| Pathway: 00970 \| BRITE: 00001, 01000, 01007, 01613, 03016	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g05280	PaHa07g05280`PaHa07g05280.1`	PaHa07g05280 \| PaHa07g05280.1 \| LOC110789184 \| 337451.A0A443P0U9 \| PB1@131567\|A-1* \| PB1@2759\|DZ-11 \| PB1@58023\|AbN-25 \| S \| ec:2.7.12.2 \| K04463 \| K14381 \| K17987 \| 04010 \| 04137 \| 04140 \| 04540 \| 04722 \| 04921 \| 05418 \| 00001 \| 01000 \| 01001 \| 03029 \|... Show annotation evidence eggNOG Preferred name: LOC110789184 \| Seed ortholog: 337451.A0A443P0U9 \| COG: S \| eggNOG OG: PB1@131567\|A-1*, PB1@2759\|DZ-11, PB1@58023\|AbN-25 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0004672 protein kinase activity; GO:0004707 MAP kinase activity; GO:0004708 MAP kinase kinase activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005819 spindle; GO:0005829 cytosol; GO:0006468 protein phosphorylation; GO:0007165 signal transduction; GO:0007420 brain development; GO:0007507 heart... KEGG EC: ec:2.7.12.2 \| KO: K04463, K14381, K17987 \| Pathway: 04010, 04137, 04140, 04540, 04722, 04921, 05418 \| BRITE: 00001, 01000, 01001, 03029, 04131, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g05490	PaHa07g05490`PaHa07g05490.1`	…ry region sequence-specific DNA binding \| RNA polymerase II complex binding \| TFIIH-class transcription factor complex binding \| osteoblast differentiation \| molecular_function \| DNA binding \| chromatin binding \| double-stranded DNA binding \| single-stranded DNA binding \| transcription corepressor a… Show annotation evidence eggNOG Preferred name: LOC104612273 \| Seed ortholog: 337451.A0A3S3N2W3 \| COG: S \| eggNOG OG: AAA_33@131567\|F-3, SPRY@131567\|B-2, SPRY@2759\|AP-7 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000228 nuclear chromosome; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000398 mRNA splicing, via spliceosome; GO:0000776 kinetochore; GO:0000785 chromatin; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA... KEGG EC: ec:2.3.2.27 \| KO: K15047 \| Pathway: 03040, 05164 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa07g05600	PaHa07g05600`PaHa07g05600.1`	…\| 03000 \| B3_368_467 \| zf-CW_633_675 \| GO:0003700 \| GO:0005634 \| GO:0048366 \| DNA-binding transcription factor activity \| nucleus \| leaf development Show annotation evidence eggNOG Preferred name: LOC101754811 \| Seed ortholog: 337451.A0A443P116 \| COG: S \| eggNOG OG: B3@131567\|A-1*, B3@3193\|BDZ-24, B3@33090\|AIL-20, zf-CW@131567\|c-5, zf-CW@2759\|BY-9, zf-CW@3193\|Op-17, zf-CW@33090\|JX-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0048366 leaf development KEGG KO: K09287 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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