Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa06g05100	PaHa06g05100`PaHa06g05100.1`	…GO:0010089 \| GO:0048316 \| GO:0048364 \| GO:0051321 \| GO:0071365 \| GO:0090058 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| male meiotic nuclear division \| chloroplast \| xylem development \| seed development \| root development \| meiotic cell cycle \| cellular response to auxi… Show annotation evidence eggNOG Preferred name: LHW \| Seed ortholog: 337451.A0A443PF44 \| COG: S \| eggNOG OG: bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|B-2, bHLH-MYC_N@3193\|m-7, bHLH-MYC_N@3398\|AU-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05140	PaHa06g05140`PaHa06g05140.1`	…GO:0006355 \| GO:0009555 \| GO:0043068 \| GO:0048658 \| GO:0052543 \| GO:0070888 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| positive regulation of programmed cell death \| anther wall tapetum development \| call… Show annotation evidence eggNOG Preferred name: BHLH10 \| Seed ortholog: 337451.A0A3S3MPA2 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|CWr-25, HLH@33090\|AAF-17, HLH@3398\|DyB-28, HLH@35493\|Aps-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0043068 positive regulation of programmed cell death; GO:0048658 anther wall tapetum development; GO:0052543 callose deposition in cell wall; GO:0070888 E-box binding	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05260	PaHa06g05260`PaHa06g05260.1`	…516 \| GO:0005634 \| GO:0019760 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| glucosinolate metabolic process Show annotation evidence eggNOG Preferred name: WRKY21 \| Seed ortholog: 337451.A0A3S3QTG6 \| COG: S \| eggNOG OG: Plant_zn_clust@131567\|A-1, Plant_zn_clust@3193\|I-4, Plant_zn_clust@3398\|By-10, WRKY@131567\|A-1, WRKY@2759\|CB-10, WRKY@3193\|AGq-23, WRKY@33090\|Ic-14, WRKY@3398\|AOc-24 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process KEGG KO: K13425 \| Pathway: 04016, 04626 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05280	PaHa06g05280`PaHa06g05280.1`	…634 \| GO:0006355 \| GO:0140728 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| GC-box binding Show annotation evidence eggNOG Preferred name: BHLH92 \| Seed ortholog: 337451.A0A3S3NKE4 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|BFY-21, HLH@33090\|AAF-17, HLH@3398\|CEE-24, HLH@35493\|AbE-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0140728 GC-box binding	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05430	PaHa06g05430`PaHa06g05430.1`	…GO:0010089 \| GO:0048316 \| GO:0048364 \| GO:0051321 \| GO:0071365 \| GO:0090058 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| male meiotic nuclear division \| chloroplast \| xylem development \| seed development \| root development \| meiotic cell cycle \| cellular response to auxi… Show annotation evidence eggNOG Preferred name: LHW \| Seed ortholog: 337451.A0A443PF44 \| COG: S \| eggNOG OG: bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|B-2, bHLH-MYC_N@3193\|m-7, bHLH-MYC_N@3398\|AU-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05450	PaHa06g05450`PaHa06g05450.1`	…O:0071491 \| transcription cis-regulatory region binding \| chromatin binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to cold \| response to light stimulus \| response to red or far red light \| seed germination \| posi… Show annotation evidence eggNOG Preferred name: DOF3.7 \| Seed ortholog: 337451.A0A3S4PEI5 \| COG: S \| eggNOG OG: zf-Dof@131567\|A-1*, zf-Dof@1437183\|AGE-21, zf-Dof@3193\|Bv-8, zf-Dof@33090\|d-5, zf-Dof@3398\|GQ-11, zf-Dof@58023\|DA-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0009639 response to red or far red light; GO:0009845 seed germination; GO:0010030 positive regulation of...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05720	PaHa06g05720`PaHa06g05720.1`	…GO:0005634 \| GO:0006355 \| GO:0007346 \| GO:0010468 \| GO:0032875 \| GO:1900459 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of mitotic cell cycle \| regulation of gene expression \| regulation of DNA endoreduplication \| p… Show annotation evidence eggNOG Preferred name: SCL28 \| Seed ortholog: 337451.A0A443PF55 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|HE-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007346 regulation of mitotic cell cycle; GO:0010468 regulation of gene expression; GO:0032875 regulation of DNA endoreduplication; GO:1900459 positive regulation of brassinosteroid mediated signaling pathway KEGG KO: K27749 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05740	PaHa06g05740`PaHa06g05740.1`	…GO:0005634 \| GO:0006355 \| GO:0007346 \| GO:0010468 \| GO:0032875 \| GO:1900459 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of mitotic cell cycle \| regulation of gene expression \| regulation of DNA endoreduplication \| p… Show annotation evidence eggNOG Preferred name: SCL28 \| Seed ortholog: 337451.A0A443PF14 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|HE-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007346 regulation of mitotic cell cycle; GO:0010468 regulation of gene expression; GO:0032875 regulation of DNA endoreduplication; GO:1900459 positive regulation of brassinosteroid mediated signaling pathway KEGG KO: K27749 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05770	PaHa06g05770`PaHa06g05770.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104608556 \| Seed ortholog: 337451.A0A3S3MT99 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05780	PaHa06g05780`PaHa06g05780.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104608556 \| Seed ortholog: 337451.A0A3S3MT99 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|KLY-41, NB-ARC@35493\|AQS-21 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13459 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05900	PaHa06g05900`PaHa06g05900.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A3S3N6R4 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05910	PaHa06g05910`PaHa06g05910.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to cold \| response to water deprivation \| cold acclimation \| positive regulation of gene expression \| glucosinolate metabolic process \| posit… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A3S4PEF2 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|DKp-29, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010628 positive regulation of gene expression; GO:0019760... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05930	PaHa06g05930`PaHa06g05930.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A443PF17 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05940	PaHa06g05940`PaHa06g05940.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcrip… Show annotation evidence eggNOG Preferred name: LOC123105942 \| Seed ortholog: 337451.A0A3S3MX13 \| COG: S \| eggNOG OG: DUF4283@131567\|A-1, DUF4283@3193\|O-4, DUF4283@3398\|IV-11, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2! GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase... KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05970	PaHa06g05970`PaHa06g05970.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A3S3QTA8 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g05990	PaHa06g05990`PaHa06g05990.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A443PF16 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06000	PaHa06g06000`PaHa06g06000.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A443PEZ9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06010	PaHa06g06010`PaHa06g06010.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A443PEX8 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06040	PaHa06g06040`PaHa06g06040.1`	…634 \| GO:0019760 \| GO:0050832 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| glucosinolate metabolic process \| defense response to fungus Show annotation evidence eggNOG Preferred name: ERF025 \| Seed ortholog: 337451.A0A443PEX8 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmA-24!, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process; GO:0050832 defense response to fungus KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06090	PaHa06g06090`PaHa06g06090.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| response to cold \| response to water deprivation \| cold acclimation \| regulation of gibberellin biosynthetic process \| positive reg… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A3S3NKA9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010371 regulation of gibberellin... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06100	PaHa06g06100`PaHa06g06100.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| response to cold \| response to water deprivation \| cold acclimation \| regulation of gibberellin biosynthetic process \| positive reg… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A3S3NKA9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010371 regulation of gibberellin... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06110	PaHa06g06110`PaHa06g06110.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| response to cold \| response to water deprivation \| cold acclimation \| regulation of gibberellin biosynthetic process \| positive reg… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A3S3NKA9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010371 regulation of gibberellin... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06130	PaHa06g06130`PaHa06g06130.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| response to cold \| response to water deprivation \| cold acclimation \| regulation of gibberellin biosynthetic process \| positive reg… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A3S3NKA9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010371 regulation of gibberellin... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06150	PaHa06g06150`PaHa06g06150.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to cold \| response to water deprivation \| cold acclimation \| positive regulation of gene expression \| glucosinolate metabolic process \| posit… Show annotation evidence eggNOG Preferred name: DREB1A \| Seed ortholog: 337451.A0A443PEZ3 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|DKp-29, AP2@33090\|KR-15, AP2@3398\|AmE-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010628 positive regulation of gene expression; GO:0019760... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06260	PaHa06g06260`PaHa06g06260.1`	…is-regulatory region binding \| DNA-binding transcription activator activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| regulation of cell size \| response to nematode \| regulation of defense response \| protein homo… Show annotation evidence eggNOG Preferred name: PCF2 \| Seed ortholog: 337451.A0A443PEY1 \| COG: S \| eggNOG OG: TCP@131221\|AC-7, TCP@131567\|A-1*, TCP@2759\|G-3, TCP@3193\|Fh-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009624 response to nematode; GO:0031347 regulation of defense response; GO:0042803...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06390	PaHa06g06390`PaHa06g06390.1`	…GO:0006355 \| GO:0009648 \| GO:0009909 \| GO:0009911 \| GO:0045893 \| GO:2000028 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| photoperiodism \| regulation of flower development \| positive regulation of flower development \| positive r… Show annotation evidence eggNOG Preferred name: FD \| Seed ortholog: 337451.A0A3S3M918 \| COG: S \| eggNOG OG: bZIP_1@131567\|BO-8!, bZIP_1@33090\|aZ-18 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009648 photoperiodism; GO:0009909 regulation of flower development; GO:0009911 positive regulation of flower development; GO:0045893 positive regulation of DNA-templated transcription; GO:2000028 regulation of photoperiodism, flowering KEGG KO: K14432 \| Pathway: 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06480	PaHa06g06480`PaHa06g06480.1`	…velopment \| pharyngeal arch artery morphogenesis \| RNA polymerase II-specific DNA-binding transcription factor binding \| DNA polymerase binding \| lens fiber cell development \| regulation of G0 to G1 transition \| dendrite guidance \| cellular response to glucose stimulus \| npBAF complex \| nBAF complex… Show annotation evidence eggNOG Preferred name: LOC104610885 \| Seed ortholog: 337451.A0A443PEW2 \| COG: S \| eggNOG OG: QLQ@1437183\|Bw-10, QLQ@2759\|A-1, QLQ@3193\|K-4, QLQ@3398\|BC-9, WRC@131221\|FY-14, WRC@131567\|A-1*, WRC@33090\|e-6, WRC@3398\|LR-18 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000182 rDNA binding; GO:0000776 kinetochore; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA... KEGG KO: K11647, K11786 \| Pathway: 03082, 04714, 05225 \| BRITE: 00001, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06610	PaHa06g06610`PaHa06g06610.1`	…GO:0098687 \| DNA binding \| minor groove of adenine-thymine-rich DNA binding \| DNA-binding transcription factor activity \| nucleus \| nucleoplasm \| chromosome \| nucleolus \| cytoplasm \| mitochondrion \| sequence-specific DNA binding \| chromosomal region Show annotation evidence eggNOG Preferred name: ESC \| Seed ortholog: 337451.A0A3S4PEB2 \| COG: S \| eggNOG OG: PCC@131567\|A-1, PCC@1437183\|Alt-26!, PCC@33090\|AUd-23 GO GO:0003677 DNA binding; GO:0003680 minor groove of adenine-thymine-rich DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005694 chromosome; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0043565 sequence-specific DNA binding; GO:0098687 chromosomal region	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g06920	PaHa06g06920`PaHa06g06920.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: ODO1 \| Seed ortholog: 337451.A0A443PEV1 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|TFc-50, Myb_DNA-binding@3193\|LZd-44, Myb_DNA-binding@33090\|Eca-37 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa06g07030	PaHa06g07030`PaHa06g07030.1`	…759 \| GO:0090058 \| GO:1901348 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| secondary cell wall \| response to fungus \| response to auxin \| response to cytokinin \| response to abscisi… Show annotation evidence eggNOG Preferred name: NAC007 \| Seed ortholog: 337451.A0A3S3NC46 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|om-16, NAM@3398\|CeJ-27, NAM@35493\|AE-6, NAM@58023\|AGB-18 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009531 secondary cell wall; GO:0009620 response to fungus; GO:0009733 response to auxin; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009741 response to brassinosteroid;...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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