Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382: Hass annotations
3+: indexed evidence types

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2,418 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select PaHa02g08340	PaHa02g08340`PaHa02g08340.1`	…\| 04218 \| 04814 \| 00001 \| TCR_80_115 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: TCX4 \| Seed ortholog: 337451.A0A3S4N451 \| COG: S \| eggNOG OG: TCR@131221\|Lt-19, TCR@131567\|A-1*, TCR@2759\|AQ-7! GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K21776 \| Pathway: 04218, 04814 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g08350	PaHa02g08350`PaHa02g08350.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g08470	PaHa02g08470`PaHa02g08470.1`	…GO:0005515 \| GO:0005576 \| GO:0005634 \| GO:0006355 \| GO:1900057 \| GO:2000028 \| DNA-binding transcription factor activity \| RNA binding \| protein binding \| extracellular region \| nucleus \| regulation of DNA-templated transcription \| positive regulation of leaf senescence \| regulation of photoperiodism… Show annotation evidence eggNOG Preferred name: LOC123137013 \| Seed ortholog: 337451.A0A3S3NF14 \| COG: COG1094 \| eggNOG OG: KH_1@131567\|B-2, KH_1@2759\|AR-7, KH_1@35493\|Li-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering KEGG KO: K13210 \| BRITE: 00001, 03019, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g08730	PaHa02g08730`PaHa02g08730.1`	…515 \| GO:0005634 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BHLH87 \| Seed ortholog: 337451.A0A3S3PS83 \| eggNOG OG: HLH@3398\|AGq-18, HLH@58023\|x-7 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g08740	PaHa02g08740`PaHa02g08740.1`	…515 \| GO:0005634 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BHLH87 \| Seed ortholog: 337451.A0A3S3PS83 \| eggNOG OG: HLH@3398\|AGq-18, HLH@58023\|x-7 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09040	PaHa02g09040`PaHa02g09040.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09050	PaHa02g09050`PaHa02g09050.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09060	PaHa02g09060`PaHa02g09060.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09150	PaHa02g09150`PaHa02g09150.1`	…scription cis-regulatory region binding \| response to hypoxia \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| heat acclimation \| cellular response to heat \| cellular response to unfolded protein \| response to hydrogen peroxide \| sequence-spe… Show annotation evidence eggNOG Preferred name: HSF30 \| Seed ortholog: 337451.A0A443N564 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWe-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|CFa-30, HSF_DNA-bind@35493\|uY-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0010286 heat acclimation; GO:0034605 cellular response to heat; GO:0034620 cellular response to unfolded protein; GO:0042542 response to hydrogen peroxide; GO:0043565... KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09250	PaHa02g09250`PaHa02g09250.1`	…LH_306_353 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009733 \| GO:1990110 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to auxin \| callus formation Show annotation evidence eggNOG Preferred name: BHLH41 \| Seed ortholog: 337451.A0A443N240 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|CWl-25, HLH@33090\|AAF-17, HLH@3398\|CtC-26, HLH@35493\|Apr-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:1990110 callus formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09280	PaHa02g09280`PaHa02g09280.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09290	PaHa02g09290`PaHa02g09290.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09330	PaHa02g09330`PaHa02g09330.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09340	PaHa02g09340`PaHa02g09340.1`	…ne response-activating signaling pathway \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| lysosome \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| double-strand … Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3NPB3 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|AHm-26, NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12, WD40@131567\|AA-6! GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0000417 HIR complex; GO:0000510 H3-H4 histone complex chaperone activity; GO:0001674 female germ cell nucleus; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 03008, 03013, 04016, 04075, 04141, 04150, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09350	PaHa02g09350`PaHa02g09350.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09400	PaHa02g09400`PaHa02g09400.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A443N271 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09430	PaHa02g09430`PaHa02g09430.1`	…scription cis-regulatory region binding \| response to hypoxia \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat \| heat acclimation \| cellular response to heat \| cellular response to unfolded protein \| response to hydrogen peroxide \| sequence-spe… Show annotation evidence eggNOG Preferred name: HSF30 \| Seed ortholog: 337451.A0A443N564 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWe-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|CFa-30, HSF_DNA-bind@35493\|uY-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0010286 heat acclimation; GO:0034605 cellular response to heat; GO:0034620 cellular response to unfolded protein; GO:0042542 response to hydrogen peroxide; GO:0043565... KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09530	PaHa02g09530`PaHa02g09530.1`	…LH_306_353 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0009733 \| GO:1990110 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to auxin \| callus formation Show annotation evidence eggNOG Preferred name: BHLH41 \| Seed ortholog: 337451.A0A443N240 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|CWl-25, HLH@33090\|AAF-17, HLH@3398\|CtC-26, HLH@35493\|Apr-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:1990110 callus formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09550	PaHa02g09550`PaHa02g09550.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A443N271 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09560	PaHa02g09560`PaHa02g09560.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09580	PaHa02g09580`PaHa02g09580.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09590	PaHa02g09590`PaHa02g09590.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3M3C7 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09600	PaHa02g09600`PaHa02g09600.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09610	PaHa02g09610`PaHa02g09610.1`	…ne response-activating signaling pathway \| molecular_function \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| lysosome \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| double-strand … Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3NPB3 \| COG: COG4886 \| eggNOG OG: LRR_8@131567\|AHm-26, NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12, WD40@131567\|AA-6! GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0000417 HIR complex; GO:0000510 H3-H4 histone complex chaperone activity; GO:0001674 female germ cell nucleus; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003700 DNA... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 03008, 03013, 04016, 04075, 04141, 04150, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09620	PaHa02g09620`PaHa02g09620.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09650	PaHa02g09650`PaHa02g09650.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g09970	PaHa02g09970`PaHa02g09970.1`	… \| HLH@3398\|JyN-34 \| S \| HLH_154_201 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: BHLH79 \| Seed ortholog: 337451.A0A3S4N4D6 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|DVq-27, HLH@33090\|AbH-19, HLH@3398\|JyN-34 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g10500	PaHa02g10500`PaHa02g10500.1`	…316 \| GO:0048510 \| GO:0055046 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| pollen development \| embryo development ending in seed dormancy \| somatic embryogenesis \| CCAAT-binding fa… Show annotation evidence eggNOG Preferred name: NFYA1 \| Seed ortholog: 337451.A0A443N2D6 \| COG: S \| eggNOG OG: CBFB_NFYA@2759\|A-1, CBFB_NFYA@33090\|AE-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0010262 somatic embryogenesis; GO:0016602 CCAAT-binding factor complex; GO:0045892 negative regulation of DNA... KEGG KO: K08064 \| Pathway: 04612, 05017, 05152 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g10580	PaHa02g10580`PaHa02g10580.1`	…O:0003727 \| GO:0005634 \| GO:0005737 \| GO:0006355 \| GO:0061157 \| DNA binding \| DNA-binding transcription factor activity \| RNA binding \| single-stranded RNA binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| mRNA destabilization Show annotation evidence eggNOG Preferred name: LOC104230786 \| Seed ortholog: 337451.A0A3S3NPI8 \| COG: S \| eggNOG OG: Ank@131221\|AHc-21, Ank@131567\|Hf-12, Ank@2759\|Nl-14, Ank@3398\|DBo-27, zf-CCCH_4@131567\|A-1*, zf-CCCH_4@2759\|AB-6 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0003727 single-stranded RNA binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0061157 mRNA destabilization KEGG EC: ec:2.3.2.27 \| KO: K23047 \| Pathway: 03015, 04144, 04213, 04814 \| BRITE: 00001, 01000, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select PaHa02g10610	PaHa02g10610`PaHa02g10610.1`	…832 \| GO:1901348 \| GO:2000652 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis \| positive regulation of DNA-templated transcription \| defense response to fungus \| positive regulation of secondary cell wall… Show annotation evidence eggNOG Preferred name: LOC104597428 \| Seed ortholog: 337451.A0A3S3LW56 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|LYW-44, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|Mih-45, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|UPw-51, Myb_DNA-binding@35493\|IIv-41 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:2000652 regulation of secondary cell wall biogenesis KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,418 genes for “transcription factor”

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